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Journal Abstract Search

106 related items for PubMed ID: 25489786

  • 1. Molecular dynamics simulations of heart-type fatty acid binding protein in apo and holo forms, and hydration structure analyses in the binding cavity.
    Matsuoka D, Sugiyama S, Murata M, Matsuoka S.
    J Phys Chem B; 2015 Jan 08; 119(1):114-27. PubMed ID: 25489786
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  • 2. Molecular dynamics simulations of apo and holo forms of fatty acid binding protein 5 and cellular retinoic acid binding protein II reveal highly mobile protein, retinoic acid ligand, and water molecules.
    Hunter NH, Bakula BC, Bruce CD.
    J Biomol Struct Dyn; 2018 May 08; 36(7):1893-1907. PubMed ID: 28566049
    [Abstract] [Full Text] [Related]

  • 3. Simulations of apo and holo-fatty acid binding protein: structure and dynamics of protein, ligand and internal water.
    Bakowies D, van Gunsteren WF.
    J Mol Biol; 2002 Jan 25; 315(4):713-36. PubMed ID: 11812142
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  • 4. Conformational and dynamics changes induced by bile acids binding to chicken liver bile acid binding protein.
    Eberini I, Guerini Rocco A, Ientile AR, Baptista AM, Gianazza E, Tomaselli S, Molinari H, Ragona L.
    Proteins; 2008 Jun 25; 71(4):1889-98. PubMed ID: 18175325
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  • 5. In silico studies of Echinococcus granulosus FABPs.
    Esteves A, Paulino M.
    J Biomol Struct Dyn; 2013 Jun 25; 31(2):224-39. PubMed ID: 22830314
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  • 6. Solution-state molecular structure of apo and oleate-liganded liver fatty acid-binding protein.
    He Y, Yang X, Wang H, Estephan R, Francis F, Kodukula S, Storch J, Stark RE.
    Biochemistry; 2007 Nov 06; 46(44):12543-56. PubMed ID: 17927211
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  • 7. Molecular dynamics simulations of adipocyte lipid-binding protein: effect of electrostatics and acyl chain unsaturation.
    Rich MR, Evans JS.
    Biochemistry; 1996 Feb 06; 35(5):1506-15. PubMed ID: 8634281
    [Abstract] [Full Text] [Related]

  • 8. Conformational dynamics of the estrogen receptor alpha: molecular dynamics simulations of the influence of binding site structure on protein dynamics.
    Celik L, Lund JD, Schiøtt B.
    Biochemistry; 2007 Feb 20; 46(7):1743-58. PubMed ID: 17249692
    [Abstract] [Full Text] [Related]

  • 9. Molecular dynamics simulations reveal that apo-HisJ can sample a closed conformation.
    Chu BC, Chan DI, DeWolf T, Periole X, Vogel HJ.
    Proteins; 2014 Mar 20; 82(3):386-98. PubMed ID: 23966221
    [Abstract] [Full Text] [Related]

  • 10. Time Scales of Conformational Gating in a Lipid-Binding Protein.
    Kaieda S, Halle B.
    J Phys Chem B; 2015 Jun 25; 119(25):7957-67. PubMed ID: 26012957
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  • 17. The Observation of Ligand-Binding-Relevant Open States of Fatty Acid Binding Protein by Molecular Dynamics Simulations and a Markov State Model.
    Guo Y, Duan M, Yang M.
    Int J Mol Sci; 2019 Jul 15; 20(14):. PubMed ID: 31311155
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  • 20. Structural dynamics of the box C/D RNA kink-turn and its complex with proteins: the role of the A-minor 0 interaction, long-residency water bridges, and structural ion-binding sites revealed by molecular simulations.
    Spacková N, Réblová K, Sponer J.
    J Phys Chem B; 2010 Aug 19; 114(32):10581-93. PubMed ID: 20701388
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