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Journal Abstract Search

320 related items for PubMed ID: 25534034

  • 1. Antibody-specific model of amino acid substitution for immunological inferences from alignments of antibody sequences.
    Mirsky A, Kazandjian L, Anisimova M.
    Mol Biol Evol; 2015 Mar; 32(3):806-19. PubMed ID: 25534034
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  • 2. Large-scale analysis of somatic hypermutations in antibodies reveals which structural regions, positions and amino acids are modified to improve affinity.
    Burkovitz A, Sela-Culang I, Ofran Y.
    FEBS J; 2014 Jan; 281(1):306-19. PubMed ID: 24279419
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  • 7. Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model.
    Neuwald AF, Liu JS.
    BMC Bioinformatics; 2004 Oct 25; 5():157. PubMed ID: 15504234
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  • 10. transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences.
    Bininda-Emonds OR.
    BMC Bioinformatics; 2005 Jun 22; 6():156. PubMed ID: 15969769
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  • 11. Modeling amino acid substitution patterns in orthologous and paralogous genes.
    Conant GC, Wagner GP, Stadler PF.
    Mol Phylogenet Evol; 2007 Feb 22; 42(2):298-307. PubMed ID: 16942891
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  • 14. Gene conversion and hypermutation during diversification of VH sequences in developing splenic germinal centers of immunized rabbits.
    Schiaffella E, Sehgal D, Anderson AO, Mage RG.
    J Immunol; 1999 Apr 01; 162(7):3984-95. PubMed ID: 10201919
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  • 16. Generating benchmarks for multiple sequence alignments and phylogenetic reconstructions.
    Stoye J, Evers D, Meyer F.
    Proc Int Conf Intell Syst Mol Biol; 1997 Apr 01; 5():303-6. PubMed ID: 9322053
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  • 17. A collection of amino acid replacement matrices derived from clusters of orthologs.
    Olsen R, Loomis WF.
    J Mol Evol; 2005 Nov 01; 61(5):659-65. PubMed ID: 16245010
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  • 19. Application of protein structure alignments to iterated hidden Markov model protocols for structure prediction.
    Scheeff ED, Bourne PE.
    BMC Bioinformatics; 2006 Sep 14; 7():410. PubMed ID: 16970830
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