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Journal Abstract Search

666 related items for PubMed ID: 25602759

  • 1. Reconstructing genome-wide protein-protein interaction networks using multiple strategies with homologous mapping.
    Lo YS, Huang SH, Luo YC, Lin CY, Yang JM.
    PLoS One; 2015; 10(1):e0116347. PubMed ID: 25602759
    [Abstract] [Full Text] [Related]

  • 2. A homologous mapping method for three-dimensional reconstruction of protein networks reveals disease-associated mutations.
    Huang SH, Lo YS, Luo YC, Tseng YY, Yang JM.
    BMC Syst Biol; 2018 Mar 19; 12(Suppl 2):13. PubMed ID: 29560828
    [Abstract] [Full Text] [Related]

  • 3. IAS: Interaction Specific GO Term Associations for Predicting Protein-Protein Interaction Networks.
    Yerneni S, Khan IK, Wei Q, Kihara D.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 Mar 19; 15(4):1247-1258. PubMed ID: 26415209
    [Abstract] [Full Text] [Related]

  • 4. Predicting genome-scale Arabidopsis-Pseudomonas syringae interactome using domain and interolog-based approaches.
    Sahu SS, Weirick T, Kaundal R.
    BMC Bioinformatics; 2014 Mar 19; 15 Suppl 11(Suppl 11):S13. PubMed ID: 25350354
    [Abstract] [Full Text] [Related]

  • 5. Bio::Homology::InterologWalk--a Perl module to build putative protein-protein interaction networks through interolog mapping.
    Gallone G, Simpson TI, Armstrong JD, Jarman AP.
    BMC Bioinformatics; 2011 Jul 18; 12():289. PubMed ID: 21767381
    [Abstract] [Full Text] [Related]

  • 6. Inferring homologous protein-protein interactions through pair position specific scoring matrix.
    Lin CY, Chen YC, Lo YS, Yang JM.
    BMC Bioinformatics; 2013 Jul 18; 14 Suppl 2(Suppl 2):S11. PubMed ID: 23367879
    [Abstract] [Full Text] [Related]

  • 7. Genome-wide protein-protein interactions and protein function exploration in cyanobacteria.
    Lv Q, Ma W, Liu H, Li J, Wang H, Lu F, Zhao C, Shi T.
    Sci Rep; 2015 Oct 22; 5():15519. PubMed ID: 26490033
    [Abstract] [Full Text] [Related]

  • 8. An integrative C. elegans protein-protein interaction network with reliability assessment based on a probabilistic graphical model.
    Huang XT, Zhu Y, Chan LL, Zhao Z, Yan H.
    Mol Biosyst; 2016 Jan 22; 12(1):85-92. PubMed ID: 26555698
    [Abstract] [Full Text] [Related]

  • 9. Integration of multiple biological features yields high confidence human protein interactome.
    Karagoz K, Sevimoglu T, Arga KY.
    J Theor Biol; 2016 Aug 21; 403():85-96. PubMed ID: 27196966
    [Abstract] [Full Text] [Related]

  • 10. PPISearch: a web server for searching homologous protein-protein interactions across multiple species.
    Chen CC, Lin CY, Lo YS, Yang JM.
    Nucleic Acids Res; 2009 Jul 21; 37(Web Server issue):W369-75. PubMed ID: 19417070
    [Abstract] [Full Text] [Related]

  • 11. Improving protein complex prediction by reconstructing a high-confidence protein-protein interaction network of Escherichia coli from different physical interaction data sources.
    Taghipour S, Zarrineh P, Ganjtabesh M, Nowzari-Dalini A.
    BMC Bioinformatics; 2017 Jan 03; 18(1):10. PubMed ID: 28049415
    [Abstract] [Full Text] [Related]

  • 12. Evolutionary analysis and interaction prediction for protein-protein interaction network in geometric space.
    Huang L, Liao L, Wu CH.
    PLoS One; 2017 Jan 03; 12(9):e0183495. PubMed ID: 28886027
    [Abstract] [Full Text] [Related]

  • 13. IIIDB: a database for isoform-isoform interactions and isoform network modules.
    Tseng YT, Li W, Chen CH, Zhang S, Chen JJ, Zhou X, Liu CC.
    BMC Genomics; 2015 Jan 03; 16 Suppl 2(Suppl 2):S10. PubMed ID: 25707505
    [Abstract] [Full Text] [Related]

  • 14. Fuse: multiple network alignment via data fusion.
    Gligorijević V, Malod-Dognin N, Pržulj N.
    Bioinformatics; 2016 Apr 15; 32(8):1195-203. PubMed ID: 26668003
    [Abstract] [Full Text] [Related]

  • 15. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
    Ou-Yang L, Yan H, Zhang XF.
    BMC Bioinformatics; 2017 Dec 01; 18(Suppl 13):463. PubMed ID: 29219066
    [Abstract] [Full Text] [Related]

  • 16. MOEPGA: A novel method to detect protein complexes in yeast protein-protein interaction networks based on MultiObjective Evolutionary Programming Genetic Algorithm.
    Cao B, Luo J, Liang C, Wang S, Song D.
    Comput Biol Chem; 2015 Oct 01; 58():173-81. PubMed ID: 26298638
    [Abstract] [Full Text] [Related]

  • 17. PrimAlign: PageRank-inspired Markovian alignment for large biological networks.
    Kalecky K, Cho YR.
    Bioinformatics; 2018 Jul 01; 34(13):i537-i546. PubMed ID: 29949962
    [Abstract] [Full Text] [Related]

  • 18. Proteome-wide prediction and analysis of the Cryptosporidium parvum protein-protein interaction network through integrative methods.
    Ren P, Yang X, Wang T, Hou Y, Zhang Z.
    Comput Struct Biotechnol J; 2022 Jul 01; 20():2322-2331. PubMed ID: 35615014
    [Abstract] [Full Text] [Related]

  • 19. PlaPPISite: a comprehensive resource for plant protein-protein interaction sites.
    Yang X, Yang S, Qi H, Wang T, Li H, Zhang Z.
    BMC Plant Biol; 2020 Feb 06; 20(1):61. PubMed ID: 32028878
    [Abstract] [Full Text] [Related]

  • 20. Computational identification of protein-protein interactions in model plant proteomes.
    Ding Z, Kihara D.
    Sci Rep; 2019 Jun 19; 9(1):8740. PubMed ID: 31217453
    [Abstract] [Full Text] [Related]

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