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Journal Abstract Search

547 related items for PubMed ID: 25708164

  • 1. Protein functional properties prediction in sparsely-label PPI networks through regularized non-negative matrix factorization.
    Wu Q, Wang Z, Li C, Ye Y, Li Y, Sun N.
    BMC Syst Biol; 2015; 9 Suppl 1(Suppl 1):S9. PubMed ID: 25708164
    [Abstract] [Full Text] [Related]

  • 2. Semi-supervised multi-label collective classification ensemble for functional genomics.
    Wu Q, Ye Y, Ho SS, Zhou S.
    BMC Genomics; 2014; 15 Suppl 9(Suppl 9):S17. PubMed ID: 25521242
    [Abstract] [Full Text] [Related]

  • 3. Collective prediction of protein functions from protein-protein interaction networks.
    Wu Q, Ye Y, Ng MK, Ho SS, Shi R.
    BMC Bioinformatics; 2014; 15 Suppl 2(Suppl 2):S9. PubMed ID: 24564855
    [Abstract] [Full Text] [Related]

  • 4. k-Partite cliques of protein interactions: A novel subgraph topology for functional coherence analysis on PPI networks.
    Liu Q, Chen YP, Li J.
    J Theor Biol; 2014 Jan 07; 340():146-54. PubMed ID: 24056214
    [Abstract] [Full Text] [Related]

  • 5. Completing sparse and disconnected protein-protein network by deep learning.
    Huang L, Liao L, Wu CH.
    BMC Bioinformatics; 2018 Mar 22; 19(1):103. PubMed ID: 29566671
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  • 6. Predicting protein function by multi-label correlated semi-supervised learning.
    Jiang JQ, McQuay LJ.
    IEEE/ACM Trans Comput Biol Bioinform; 2012 Mar 22; 9(4):1059-69. PubMed ID: 22595236
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  • 7. Protein function prediction based on data fusion and functional interrelationship.
    Meng J, Wekesa JS, Shi GL, Luan YS.
    Math Biosci; 2016 Apr 22; 274():25-32. PubMed ID: 26869536
    [Abstract] [Full Text] [Related]

  • 8. MOEPGA: A novel method to detect protein complexes in yeast protein-protein interaction networks based on MultiObjective Evolutionary Programming Genetic Algorithm.
    Cao B, Luo J, Liang C, Wang S, Song D.
    Comput Biol Chem; 2015 Oct 22; 58():173-81. PubMed ID: 26298638
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  • 9. Incorporating topological information for predicting robust cancer subnetwork markers in human protein-protein interaction network.
    Khunlertgit N, Yoon BJ.
    BMC Bioinformatics; 2016 Oct 06; 17(Suppl 13):351. PubMed ID: 27766944
    [Abstract] [Full Text] [Related]

  • 10. DualNetGO: a dual network model for protein function prediction via effective feature selection.
    Chen Z, Luo Q.
    Bioinformatics; 2024 Jul 01; 40(7):. PubMed ID: 38963311
    [Abstract] [Full Text] [Related]

  • 11. Fitting a geometric graph to a protein-protein interaction network.
    Higham DJ, Rasajski M, Przulj N.
    Bioinformatics; 2008 Apr 15; 24(8):1093-9. PubMed ID: 18344248
    [Abstract] [Full Text] [Related]

  • 12. Identifying spurious interactions and predicting missing interactions in the protein-protein interaction networks via a generative network model.
    Zhu Y, Zhang XF, Dai DQ, Wu MY.
    IEEE/ACM Trans Comput Biol Bioinform; 2013 Apr 15; 10(1):219-25. PubMed ID: 23702559
    [Abstract] [Full Text] [Related]

  • 13. Protein complex prediction in large ontology attributed protein-protein interaction networks.
    Zhang Y, Lin H, Yang Z, Wang J, Li Y, Xu B.
    IEEE/ACM Trans Comput Biol Bioinform; 2013 Apr 15; 10(3):729-41. PubMed ID: 24091405
    [Abstract] [Full Text] [Related]

  • 14. Network based prediction of protein localisation using diffusion kernel.
    Mondal A, Hu J.
    Int J Data Min Bioinform; 2014 Apr 15; 9(4):386-400. PubMed ID: 25757246
    [Abstract] [Full Text] [Related]

  • 15. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
    Alkan F, Erten C.
    Bioinformatics; 2015 Jul 15; 31(14):2356-63. PubMed ID: 25788620
    [Abstract] [Full Text] [Related]

  • 16. A method for predicting protein complex in dynamic PPI networks.
    Zhang Y, Lin H, Yang Z, Wang J, Liu Y, Sang S.
    BMC Bioinformatics; 2016 Jul 25; 17 Suppl 7(Suppl 7):229. PubMed ID: 27454775
    [Abstract] [Full Text] [Related]

  • 17. ConnectedAlign: a PPI network alignment method for identifying conserved protein complexes across multiple species.
    Gao J, Song B, Hu X, Yan F, Wang J.
    BMC Bioinformatics; 2018 Aug 13; 19(Suppl 9):286. PubMed ID: 30367584
    [Abstract] [Full Text] [Related]

  • 18. An uncertain model-based approach for identifying dynamic protein complexes in uncertain protein-protein interaction networks.
    Zhang Y, Lin H, Yang Z, Wang J, Liu Y.
    BMC Genomics; 2017 Oct 16; 18(Suppl 7):743. PubMed ID: 29513194
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  • 19. Predicting protein function by frequent functional association pattern mining in protein interaction networks.
    Cho YR, Zhang A.
    IEEE Trans Inf Technol Biomed; 2010 Jan 16; 14(1):30-6. PubMed ID: 19726271
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  • 20. Transferring network topological knowledge for predicting protein-protein interactions.
    Xu Q, Xiang EW, Yang Q.
    Proteomics; 2011 Oct 16; 11(19):3818-25. PubMed ID: 21770035
    [Abstract] [Full Text] [Related]

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