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Journal Abstract Search

932 related items for PubMed ID: 25725498

  • 1. L-GRAAL: Lagrangian graphlet-based network aligner.
    Malod-Dognin N, Pržulj N.
    Bioinformatics; 2015 Jul 01; 31(13):2182-9. PubMed ID: 25725498
    [Abstract] [Full Text] [Related]

  • 2. Integrative network alignment reveals large regions of global network similarity in yeast and human.
    Kuchaiev O, Przulj N.
    Bioinformatics; 2011 May 15; 27(10):1390-6. PubMed ID: 21414992
    [Abstract] [Full Text] [Related]

  • 3. Fuse: multiple network alignment via data fusion.
    Gligorijević V, Malod-Dognin N, Pržulj N.
    Bioinformatics; 2016 Apr 15; 32(8):1195-203. PubMed ID: 26668003
    [Abstract] [Full Text] [Related]

  • 4. C-GRAAL: common-neighbors-based global GRAph ALignment of biological networks.
    Memišević V, Pržulj N.
    Integr Biol (Camb); 2012 Jul 15; 4(7):734-43. PubMed ID: 22234340
    [Abstract] [Full Text] [Related]

  • 5. Unified Alignment of Protein-Protein Interaction Networks.
    Malod-Dognin N, Ban K, Pržulj N.
    Sci Rep; 2017 Apr 19; 7(1):953. PubMed ID: 28424527
    [Abstract] [Full Text] [Related]

  • 6. RedNemo: topology-based PPI network reconstruction via repeated diffusion with neighborhood modifications.
    Alkan F, Erten C.
    Bioinformatics; 2017 Feb 15; 33(4):537-544. PubMed ID: 27797764
    [Abstract] [Full Text] [Related]

  • 7. Discovering large conserved functional components in global network alignment by graph matching.
    Zhu Y, Li Y, Liu J, Qin L, Yu JX.
    BMC Genomics; 2018 Sep 24; 19(Suppl 7):670. PubMed ID: 30255780
    [Abstract] [Full Text] [Related]

  • 8. NETAL: a new graph-based method for global alignment of protein-protein interaction networks.
    Neyshabur B, Khadem A, Hashemifar S, Arab SS.
    Bioinformatics; 2013 Jul 01; 29(13):1654-62. PubMed ID: 23696650
    [Abstract] [Full Text] [Related]

  • 9. MAGNA: Maximizing Accuracy in Global Network Alignment.
    Saraph V, Milenković T.
    Bioinformatics; 2014 Oct 15; 30(20):2931-40. PubMed ID: 25015987
    [Abstract] [Full Text] [Related]

  • 10. Joint Alignment of Multiple Protein-Protein Interaction Networks via Convex Optimization.
    Hashemifar S, Huang Q, Xu J.
    J Comput Biol; 2016 Nov 15; 23(11):903-911. PubMed ID: 27428933
    [Abstract] [Full Text] [Related]

  • 11. GraphCrunch 2: Software tool for network modeling, alignment and clustering.
    Kuchaiev O, Stevanović A, Hayes W, Pržulj N.
    BMC Bioinformatics; 2011 Jan 19; 12():24. PubMed ID: 21244715
    [Abstract] [Full Text] [Related]

  • 12. A protein-protein interaction network aligner study in the multi-objective domain.
    Menor-Flores M, Vega-Rodríguez MA.
    Comput Methods Programs Biomed; 2024 Jun 19; 250():108188. PubMed ID: 38657382
    [Abstract] [Full Text] [Related]

  • 13. PrimAlign: PageRank-inspired Markovian alignment for large biological networks.
    Kalecky K, Cho YR.
    Bioinformatics; 2018 Jul 01; 34(13):i537-i546. PubMed ID: 29949962
    [Abstract] [Full Text] [Related]

  • 14. Efficient estimation of graphlet frequency distributions in protein-protein interaction networks.
    Przulj N, Corneil DG, Jurisica I.
    Bioinformatics; 2006 Apr 15; 22(8):974-80. PubMed ID: 16452112
    [Abstract] [Full Text] [Related]

  • 15. A Global Network Alignment Method Using Discrete Particle Swarm Optimization.
    Huang J, Gong M, Ma L.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 Apr 15; 15(3):705-718. PubMed ID: 27775534
    [Abstract] [Full Text] [Related]

  • 16. DualAligner: a dual alignment-based strategy to align protein interaction networks.
    Seah BS, Bhowmick SS, Dewey CF.
    Bioinformatics; 2014 Sep 15; 30(18):2619-26. PubMed ID: 24872427
    [Abstract] [Full Text] [Related]

  • 17. Index-Based Network Aligner of Protein-Protein Interaction Networks.
    Elmsallati A, Msalati A, Kalita J.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 Sep 15; 15(1):330-336. PubMed ID: 28113986
    [Abstract] [Full Text] [Related]

  • 18. ModuleAlign: module-based global alignment of protein-protein interaction networks.
    Hashemifar S, Ma J, Naveed H, Canzar S, Xu J.
    Bioinformatics; 2016 Sep 01; 32(17):i658-i664. PubMed ID: 27587686
    [Abstract] [Full Text] [Related]

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  • 20. Pairwise alignment of protein interaction networks.
    Koyutürk M, Kim Y, Topkara U, Subramaniam S, Szpankowski W, Grama A.
    J Comput Biol; 2006 Mar 01; 13(2):182-99. PubMed ID: 16597234
    [Abstract] [Full Text] [Related]

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