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153 related items for PubMed ID: 25788250

  • 1. An anisotropic coarse-grained model based on Gay-Berne and electric multipole potentials and its application to simulate a DMPC bilayer in an implicit solvent model.
    Shen H, Li Y, Xu P, Li X, Chu H, Zhang D, Li G.
    J Comput Chem; 2015 Jun 05; 36(15):1103-13. PubMed ID: 25788250
    [Abstract] [Full Text] [Related]

  • 2. An Anisotropic Coarse-Grained Model for Proteins Based On Gay-Berne and Electric Multipole Potentials.
    Shen H, Li Y, Ren P, Zhang D, Li G.
    J Chem Theory Comput; 2014 Feb 10; 10(2):731-750. PubMed ID: 24659927
    [Abstract] [Full Text] [Related]

  • 3. Generalized coarse-grained model based on point multipole and Gay-Berne potentials.
    Golubkov PA, Ren P.
    J Chem Phys; 2006 Aug 14; 125(6):64103. PubMed ID: 16942269
    [Abstract] [Full Text] [Related]

  • 4. Coarse-Grained Modeling of Nucleic Acids Using Anisotropic Gay-Berne and Electric Multipole Potentials.
    Li G, Shen H, Zhang D, Li Y, Wang H.
    J Chem Theory Comput; 2016 Feb 09; 12(2):676-93. PubMed ID: 26717419
    [Abstract] [Full Text] [Related]

  • 5. Systematic implicit solvent coarse graining of dimyristoylphosphatidylcholine lipids.
    Mirzoev A, Lyubartsev AP.
    J Comput Chem; 2014 Jun 15; 35(16):1208-18. PubMed ID: 24777775
    [Abstract] [Full Text] [Related]

  • 6. A multiscale coarse-graining method for biomolecular systems.
    Izvekov S, Voth GA.
    J Phys Chem B; 2005 Feb 24; 109(7):2469-73. PubMed ID: 16851243
    [Abstract] [Full Text] [Related]

  • 7. A comparison of DMPC- and DLPE-based lipid bilayers.
    Damodaran KV, Merz KM.
    Biophys J; 1994 Apr 24; 66(4):1076-87. PubMed ID: 8038380
    [Abstract] [Full Text] [Related]

  • 8. Coarse-grained simulations for organic molecular liquids based on Gay-Berne and electric multipole potentials.
    Xu P, Shen H, Yang L, Ding Y, Li B, Shao Y, Mao Y, Li G.
    J Mol Model; 2013 Feb 24; 19(2):551-8. PubMed ID: 22961621
    [Abstract] [Full Text] [Related]

  • 9. Molecular dynamics simulations of local anesthetic articaine in a lipid bilayer.
    Mojumdar EH, Lyubartsev AP.
    Biophys Chem; 2010 Dec 24; 153(1):27-35. PubMed ID: 21041015
    [Abstract] [Full Text] [Related]

  • 10. Molecular simulation of the DMPC-cholesterol phase diagram.
    de Meyer FJ, Benjamini A, Rodgers JM, Misteli Y, Smit B.
    J Phys Chem B; 2010 Aug 19; 114(32):10451-61. PubMed ID: 20662483
    [Abstract] [Full Text] [Related]

  • 11. Molecular dynamics simulation study on the phase behavior of the Gay-Berne model with a terminal dipole and a flexible tail.
    Fukunaga H, Takimoto J, Doi M.
    J Chem Phys; 2004 Apr 22; 120(16):7792-800. PubMed ID: 15267694
    [Abstract] [Full Text] [Related]

  • 12. Understanding the interaction of block copolymers with DMPC lipid bilayer using coarse-grained molecular dynamics simulations.
    Hezaveh S, Samanta S, De Nicola A, Milano G, Roccatano D.
    J Phys Chem B; 2012 Dec 13; 116(49):14333-45. PubMed ID: 23137298
    [Abstract] [Full Text] [Related]

  • 13. Molecular dynamics simulation study of the effect of DMSO on structural and permeation properties of DMPC lipid bilayers.
    Lin J, Novak B, Moldovan D.
    J Phys Chem B; 2012 Feb 02; 116(4):1299-308. PubMed ID: 22191390
    [Abstract] [Full Text] [Related]

  • 14. Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayer.
    Woolf TB, Roux B.
    Proteins; 1996 Jan 02; 24(1):92-114. PubMed ID: 8628736
    [Abstract] [Full Text] [Related]

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  • 16. Molecular Dynamics Investigation of the Ternary Bilayer Formed by Saturated Phosphotidylcholine, Sphingomyelin, and Cholesterol.
    Smith AK, Klimov DK.
    J Phys Chem B; 2018 Dec 13; 122(49):11311-11325. PubMed ID: 30156415
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