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Journal Abstract Search

79 related items for PubMed ID: 2580563

  • 1. [Binding of small molecules with nucleic acids having tertiary structure].
    Nechipurenko IuD.
    Biofizika; 1985; 30(2):231-2. PubMed ID: 2580563
    [Abstract] [Full Text] [Related]

  • 2. A general method of analysis of ligand binding to competing macromolecules using the spectroscopic signal originating from a reference macromolecule. Application to Escherichia coli replicative helicase DnaB protein nucleic acid interactions.
    Jezewska MJ, Bujalowski W.
    Biochemistry; 1996 Feb 20; 35(7):2117-28. PubMed ID: 8652554
    [Abstract] [Full Text] [Related]

  • 3. [Cooperative effects during the binding of large ligands with DNA. Non-contact interaction between adsorbed ligands].
    Nechipurenko IuD, Zasedatelev AS, Gurskiĭ GV.
    Mol Biol (Mosk); 1984 Feb 20; 18(3):798-812. PubMed ID: 6472276
    [Abstract] [Full Text] [Related]

  • 4. Novel drug discovery and molecular biological methods, via DNA, RNA and protein changes using structure-function transitions: Transitional structural chemogenomics, transitional structural chemoproteomics and novel multi-stranded nucleic acid microarray.
    Gagna CE, Lambert WC.
    Med Hypotheses; 2006 Feb 20; 67(5):1099-114. PubMed ID: 16828979
    [Abstract] [Full Text] [Related]

  • 5. Competition dialysis: a method for the study of structural selective nucleic acid binding.
    Ragazzon PA, Garbett NC, Chaires JB.
    Methods; 2007 Jun 20; 42(2):173-82. PubMed ID: 17472899
    [Abstract] [Full Text] [Related]

  • 6. Recognition of planar and nonplanar ligands in the malachite green-RNA aptamer complex.
    Flinders J, DeFina SC, Brackett DM, Baugh C, Wilson C, Dieckmann T.
    Chembiochem; 2004 Jan 03; 5(1):62-72. PubMed ID: 14695514
    [Abstract] [Full Text] [Related]

  • 7. Possibilities of the method of step-by-step complication of ligand structure in studies of protein--nucleic acid interactions: mechanisms of functioning of some replication, repair, topoisomerization, and restriction enzymes.
    Bugreev DV, Nevinsky GA.
    Biochemistry (Mosc); 1999 Mar 03; 64(3):237-49. PubMed ID: 10205294
    [Abstract] [Full Text] [Related]

  • 8. Hydration effects on DNA double helix stability modulates ligand binding to natural DNA in response to changes in water activity.
    Ruggiero Neto J, Pereira de Souza F, Colombo MF.
    Cell Mol Biol (Noisy-le-grand); 2001 Jul 03; 47(5):801-14. PubMed ID: 11728094
    [Abstract] [Full Text] [Related]

  • 9. The energetics of small internal loops in RNA.
    Schroeder SJ, Burkard ME, Turner DH.
    Biopolymers; 2001 Jul 03; 52(4):157-67. PubMed ID: 11295748
    [Abstract] [Full Text] [Related]

  • 10. Calculation of ligand-nucleic acid binding free energies with the generalized-born model in DOCK.
    Kang X, Shafer RH, Kuntz ID.
    Biopolymers; 2004 Feb 05; 73(2):192-204. PubMed ID: 14755577
    [Abstract] [Full Text] [Related]

  • 11. PEARLS: program for energetic analysis of receptor-ligand system.
    Han LY, Lin HH, Li ZR, Zheng CJ, Cao ZW, Xie B, Chen YZ.
    J Chem Inf Model; 2006 Feb 05; 46(1):445-50. PubMed ID: 16426079
    [Abstract] [Full Text] [Related]

  • 12. Noncovalent interactions with DNA: an overview.
    Strekowski L, Wilson B.
    Mutat Res; 2007 Oct 01; 623(1-2):3-13. PubMed ID: 17445837
    [Abstract] [Full Text] [Related]

  • 13. A simple molecular model for thermophilic adaptation of functional nucleic acids.
    Blose JM, Silverman SK, Bevilacqua PC.
    Biochemistry; 2007 Apr 10; 46(14):4232-40. PubMed ID: 17361991
    [Abstract] [Full Text] [Related]

  • 14. In vitro selection of dopamine RNA ligands.
    Mannironi C, Di Nardo A, Fruscoloni P, Tocchini-Valentini GP.
    Biochemistry; 1997 Aug 12; 36(32):9726-34. PubMed ID: 9245404
    [Abstract] [Full Text] [Related]

  • 15. Minimum sequence requirements for selective RNA-ligand binding: a molecular mechanics algorithm using molecular dynamics and free-energy techniques.
    Anderson PC, Mecozzi S.
    J Comput Chem; 2006 Nov 15; 27(14):1631-40. PubMed ID: 16900493
    [Abstract] [Full Text] [Related]

  • 16. Specific recognition of napthyridine-based ligands toward guanine-containing bulges in RNA duplexes and RNA-DNA heteroduplexes.
    Tok JB, Bi L, Saenz M.
    Bioorg Med Chem Lett; 2005 Feb 01; 15(3):827-31. PubMed ID: 15664866
    [Abstract] [Full Text] [Related]

  • 17. Electrostatic and non-electrostatic contributions to the binding free energies of anthracycline antibiotics to DNA.
    Baginski M, Fogolari F, Briggs JM.
    J Mol Biol; 1997 Nov 28; 274(2):253-67. PubMed ID: 9398531
    [Abstract] [Full Text] [Related]

  • 18. Mammalian heterogeneous ribonucleoprotein A1 and its constituent domains. Nucleic acid interaction, structural stability and self-association.
    Casas-Finet JR, Smith JD, Kumar A, Kim JG, Wilson SH, Karpel RL.
    J Mol Biol; 1993 Feb 20; 229(4):873-89. PubMed ID: 8445653
    [Abstract] [Full Text] [Related]

  • 19. [Kinetics of ligand binding to nucleic acids at random fillings].
    Arakelian VB, Babaian SIu, Tairian VI, Arakelian AV, Parsadanian MA, Vardevanian PO.
    Biofizika; 2006 Feb 20; 51(3):424-9. PubMed ID: 16808340
    [Abstract] [Full Text] [Related]

  • 20. [Study of the structural organization of RNA from phage MS2 using fluorescent dyes].
    Borisova OF, Grechko VV, Aleshkina LA, Kuznetsova NV.
    Mol Biol (Mosk); 1984 Feb 20; 18(6):1617-24. PubMed ID: 6521739
    [Abstract] [Full Text] [Related]

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