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Journal Abstract Search

299 related items for PubMed ID: 25812974

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  • 3. Experimental and computational analysis of the transition state for ribonuclease A-catalyzed RNA 2'-O-transphosphorylation.
    Gu H, Zhang S, Wong KY, Radak BK, Dissanayake T, Kellerman DL, Dai Q, Miyagi M, Anderson VE, York DM, Piccirilli JA, Harris ME.
    Proc Natl Acad Sci U S A; 2013 Aug 06; 110(32):13002-7. PubMed ID: 23878223
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  • 6. Kinetic isotope effects in the characterization of catalysis by protein tyrosine phosphatases.
    Hengge AC.
    Biochim Biophys Acta; 2015 Nov 06; 1854(11):1768-75. PubMed ID: 25840000
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  • 7. Ab initio path-integral calculations of kinetic and equilibrium isotope effects on base-catalyzed RNA transphosphorylation models.
    Wong KY, Xu Y, York DM.
    J Comput Chem; 2014 Jun 30; 35(17):1302-16. PubMed ID: 24841935
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  • 8. Understanding the transition states of phosphodiester bond cleavage: insights from heavy atom isotope effects.
    Cassano AG, Anderson VE, Harris ME.
    Biopolymers; 2004 Jan 30; 73(1):110-29. PubMed ID: 14691944
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  • 9. Experimental analyses of the chemical dynamics of ribozyme catalysis.
    Harris ME, Cassano AG.
    Curr Opin Chem Biol; 2008 Dec 30; 12(6):626-39. PubMed ID: 18952193
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  • 11. Mechanistic investigations of the hydrolysis of amides, oxoesters and thioesters via kinetic isotope effects and positional isotope exchange.
    Robins LI, Fogle EJ, Marlier JF.
    Biochim Biophys Acta; 2015 Nov 30; 1854(11):1756-67. PubMed ID: 25543107
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  • 12. Isotope effect analyses provide evidence for an altered transition state for RNA 2'-O-transphosphorylation catalyzed by Zn(2+).
    Zhang S, Gu H, Chen H, Strong E, Ollie EW, Kellerman D, Liang D, Miyagi M, Anderson VE, Piccirilli JA, York DM, Harris ME.
    Chem Commun (Camb); 2016 Mar 25; 52(24):4462-5. PubMed ID: 26859380
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  • 14. Catalytic metal ions and enzymatic processing of DNA and RNA.
    Palermo G, Cavalli A, Klein ML, Alfonso-Prieto M, Dal Peraro M, De Vivo M.
    Acc Chem Res; 2015 Feb 17; 48(2):220-8. PubMed ID: 25590654
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  • 15. Dinuclear Zn(II) complex catalyzed phosphodiester cleavage proceeds via a concerted mechanism: a density functional theory study.
    Gao H, Ke Z, DeYonker NJ, Wang J, Xu H, Mao ZW, Phillips DL, Zhao C.
    J Am Chem Soc; 2011 Mar 09; 133(9):2904-15. PubMed ID: 21319769
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  • 16. Kinetic isotope effects for alkaline phosphatase reactions: implications for the role of active-site metal ions in catalysis.
    Zalatan JG, Catrina I, Mitchell R, Grzyska PK, O'brien PJ, Herschlag D, Hengge AC.
    J Am Chem Soc; 2007 Aug 08; 129(31):9789-98. PubMed ID: 17630738
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  • 17. Review of computer simulations of isotope effects on biochemical reactions: From the Bigeleisen equation to Feynman's path integral.
    Wong KY, Xu Y, Xu L.
    Biochim Biophys Acta; 2015 Nov 08; 1854(11):1782-94. PubMed ID: 25936775
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  • 19. Transition state structure of E. coli tRNA-specific adenosine deaminase.
    Luo M, Schramm VL.
    J Am Chem Soc; 2008 Feb 27; 130(8):2649-55. PubMed ID: 18251477
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  • 20. Transition state analysis of enolpyruvylshikimate 3-phosphate (EPSP) synthase (AroA)-catalyzed EPSP hydrolysis.
    Lou M, Burger SK, Gilpin ME, Gawuga V, Capretta A, Berti PJ.
    J Am Chem Soc; 2012 Aug 08; 134(31):12958-69. PubMed ID: 22765279
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