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Journal Abstract Search

344 related items for PubMed ID: 25849913

  • 1. Probing the kinetic and thermodynamic consequences of the tetraloop/tetraloop receptor monovalent ion-binding site in P4-P6 RNA by smFRET.
    Bisaria N, Herschlag D.
    Biochem Soc Trans; 2015 Apr; 43(2):172-8. PubMed ID: 25849913
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  • 4. A specific monovalent metal ion integral to the AA platform of the RNA tetraloop receptor.
    Basu S, Rambo RP, Strauss-Soukup J, Cate JH, Ferré-D'Amaré AR, Strobel SA, Doudna JA.
    Nat Struct Biol; 1998 Nov; 5(11):986-92. PubMed ID: 9808044
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  • 5. Principles of RNA compaction: insights from the equilibrium folding pathway of the P4-P6 RNA domain in monovalent cations.
    Takamoto K, Das R, He Q, Doniach S, Brenowitz M, Herschlag D, Chance MR.
    J Mol Biol; 2004 Nov 05; 343(5):1195-206. PubMed ID: 15491606
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  • 8. Role of counterion condensation in folding of the Tetrahymena ribozyme. II. Counterion-dependence of folding kinetics.
    Heilman-Miller SL, Pan J, Thirumalai D, Woodson SA.
    J Mol Biol; 2001 May 25; 309(1):57-68. PubMed ID: 11491301
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  • 10. Monovalent ion-mediated folding of the Tetrahymena thermophila ribozyme.
    Shcherbakova I, Gupta S, Chance MR, Brenowitz M.
    J Mol Biol; 2004 Oct 01; 342(5):1431-42. PubMed ID: 15364572
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  • 11. Metal ion dependence, thermodynamics, and kinetics for intramolecular docking of a GAAA tetraloop and receptor connected by a flexible linker.
    Downey CD, Fiore JL, Stoddard CD, Hodak JH, Nesbitt DJ, Pardi A.
    Biochemistry; 2006 Mar 21; 45(11):3664-73. PubMed ID: 16533049
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  • 13. An RNA folding motif: GNRA tetraloop-receptor interactions.
    Fiore JL, Nesbitt DJ.
    Q Rev Biophys; 2013 Aug 21; 46(3):223-64. PubMed ID: 23915736
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  • 15. Single-molecule FRET studies of RNA folding: a Diels-Alderase ribozyme with photolabile nucleotide modifications.
    Kobitski AY, Schäfer S, Nierth A, Singer M, Jäschke A, Nienhaus GU.
    J Phys Chem B; 2013 Oct 24; 117(42):12800-6. PubMed ID: 23621553
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  • 18. Folding mechanism of the Tetrahymena ribozyme P4-P6 domain.
    Deras ML, Brenowitz M, Ralston CY, Chance MR, Woodson SA.
    Biochemistry; 2000 Sep 12; 39(36):10975-85. PubMed ID: 10998234
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  • 20. Perturbed folding kinetics of circularly permuted RNAs with altered topology.
    Heilman-Miller SL, Woodson SA.
    J Mol Biol; 2003 Apr 25; 328(2):385-94. PubMed ID: 12691747
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