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Journal Abstract Search

982 related items for PubMed ID: 25887585

  • 1. NMF-mGPU: non-negative matrix factorization on multi-GPU systems.
    Mejía-Roa E, Tabas-Madrid D, Setoain J, García C, Tirado F, Pascual-Montano A.
    BMC Bioinformatics; 2015 Feb 13; 16():43. PubMed ID: 25887585
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  • 5. A fast forward projection using multithreads for multirays on GPUs in medical image reconstruction.
    Chou CY, Chuo YY, Hung Y, Wang W.
    Med Phys; 2011 Jul 13; 38(7):4052-65. PubMed ID: 21859004
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  • 6. Parallel Implementation of MAFFT on CUDA-Enabled Graphics Hardware.
    Zhu X, Li K, Salah A, Shi L, Li K.
    IEEE/ACM Trans Comput Biol Bioinform; 2015 Jul 13; 12(1):205-18. PubMed ID: 26357090
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  • 7. Fully 3D list-mode time-of-flight PET image reconstruction on GPUs using CUDA.
    Cui JY, Pratx G, Prevrhal S, Levin CS.
    Med Phys; 2011 Dec 13; 38(12):6775-86. PubMed ID: 22149859
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  • 8. Fast parallel Markov clustering in bioinformatics using massively parallel computing on GPU with CUDA and ELLPACK-R sparse format.
    Bustamam A, Burrage K, Hamilton NA.
    IEEE/ACM Trans Comput Biol Bioinform; 2012 Dec 13; 9(3):679-92. PubMed ID: 21483031
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  • 9. Multi-GPU implementation of a VMAT treatment plan optimization algorithm.
    Tian Z, Peng F, Folkerts M, Tan J, Jia X, Jiang SB.
    Med Phys; 2015 Jun 13; 42(6):2841-52. PubMed ID: 26127037
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  • 11. WFA-GPU: gap-affine pairwise read-alignment using GPUs.
    Aguado-Puig Q, Doblas M, Matzoros C, Espinosa A, Moure JC, Marco-Sola S, Moreto M.
    Bioinformatics; 2023 Dec 01; 39(12):. PubMed ID: 37975878
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  • 12. NMF Clustering: Accessible NMF-based Clustering Utilizing GPU Acceleration.
    Liefeld T, Huang E, Wenzel AT, Yoshimoto K, Sharma AK, Sicklick JK, Mesirov JP, Reich M.
    J Bioinform Syst Biol; 2023 Dec 01; 6(4):379-383. PubMed ID: 38390437
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  • 13. CUDA-BLASTP: accelerating BLASTP on CUDA-enabled graphics hardware.
    Liu W, Schmidt B, Müller-Wittig W.
    IEEE/ACM Trans Comput Biol Bioinform; 2011 Dec 01; 8(6):1678-84. PubMed ID: 21339531
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  • 14. cuTauLeaping: a GPU-powered tau-leaping stochastic simulator for massive parallel analyses of biological systems.
    Nobile MS, Cazzaniga P, Besozzi D, Pescini D, Mauri G.
    PLoS One; 2014 Dec 01; 9(3):e91963. PubMed ID: 24663957
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  • 15. LASSIE: simulating large-scale models of biochemical systems on GPUs.
    Tangherloni A, Nobile MS, Besozzi D, Mauri G, Cazzaniga P.
    BMC Bioinformatics; 2017 May 10; 18(1):246. PubMed ID: 28486952
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  • 16. Graphics Processing Unit-Enhanced Genetic Algorithms for Solving the Temporal Dynamics of Gene Regulatory Networks.
    García-Calvo R, Guisado JL, Diaz-Del-Rio F, Córdoba A, Jiménez-Morales F.
    Evol Bioinform Online; 2018 May 10; 14():1176934318767889. PubMed ID: 29662297
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  • 17. MIGS-GPU: Microarray Image Gridding and Segmentation on the GPU.
    Katsigiannis S, Zacharia E, Maroulis D.
    IEEE J Biomed Health Inform; 2017 May 10; 21(3):867-874. PubMed ID: 26960232
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  • 18. Concurrent query processing in a GPU-based database system.
    Li H, Tu YC, Zeng B.
    PLoS One; 2019 May 10; 14(4):e0214720. PubMed ID: 30990851
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  • 19. A performance/cost evaluation for a GPU-based drug discovery application on volunteer computing.
    Guerrero GD, Imbernón B, Pérez-Sánchez H, Sanz F, García JM, Cecilia JM.
    Biomed Res Int; 2014 May 10; 2014():474219. PubMed ID: 25025055
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  • 20. A nonvoxel-based dose convolution/superposition algorithm optimized for scalable GPU architectures.
    Neylon J, Sheng K, Yu V, Chen Q, Low DA, Kupelian P, Santhanam A.
    Med Phys; 2014 Oct 10; 41(10):101711. PubMed ID: 25281950
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