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1075 related items for PubMed ID: 25903863

  • 1. Dynamic force matching: A method for constructing dynamical coarse-grained models with realistic time dependence.
    Davtyan A, Dama JF, Voth GA, Andersen HC.
    J Chem Phys; 2015 Apr 21; 142(15):154104. PubMed ID: 25903863
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  • 3. Separation of time scale and coupling in the motion governed by the coarse-grained and fine degrees of freedom in a polypeptide backbone.
    Murarka RK, Liwo A, Scheraga HA.
    J Chem Phys; 2007 Oct 21; 127(15):155103. PubMed ID: 17949219
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  • 4. The multiscale coarse-graining method. VIII. Multiresolution hierarchical basis functions and basis function selection in the construction of coarse-grained force fields.
    Das A, Andersen HC.
    J Chem Phys; 2012 May 21; 136(19):194113. PubMed ID: 22612086
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  • 6. The multiscale coarse-graining method. IX. A general method for construction of three body coarse-grained force fields.
    Das A, Andersen HC.
    J Chem Phys; 2012 May 21; 136(19):194114. PubMed ID: 22612087
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  • 7. Modeling real dynamics in the coarse-grained representation of condensed phase systems.
    Izvekov S, Voth GA.
    J Chem Phys; 2006 Oct 21; 125(15):151101. PubMed ID: 17059230
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  • 9. The multiscale coarse-graining method. III. A test of pairwise additivity of the coarse-grained potential and of new basis functions for the variational calculation.
    Das A, Andersen HC.
    J Chem Phys; 2009 Jul 21; 131(3):034102. PubMed ID: 19624176
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  • 10. The multiscale coarse-graining method. X. Improved algorithms for constructing coarse-grained potentials for molecular systems.
    Das A, Lu L, Andersen HC, Voth GA.
    J Chem Phys; 2012 May 21; 136(19):194115. PubMed ID: 22612088
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  • 13. Effective force coarse-graining.
    Wang Y, Noid WG, Liu P, Voth GA.
    Phys Chem Chem Phys; 2009 Mar 28; 11(12):2002-15. PubMed ID: 19280011
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  • 18. The CUMULUS coarse graining method: transferable potentials for water and solutes.
    van Hoof B, Markvoort AJ, van Santen RA, Hilbers PA.
    J Phys Chem B; 2011 Aug 25; 115(33):10001-12. PubMed ID: 21740053
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  • 20. Semi-bottom-up coarse graining of water based on microscopic simulations.
    Gao L, Fang W.
    J Chem Phys; 2011 Nov 14; 135(18):184101. PubMed ID: 22088046
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