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Journal Abstract Search

451 related items for PubMed ID: 26283419

  • 1. BEACON: automated tool for Bacterial GEnome Annotation ComparisON.
    Kalkatawi M, Alam I, Bajic VB.
    BMC Genomics; 2015 Aug 18; 16(1):616. PubMed ID: 26283419
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  • 4. Genome Annotation Transfer Utility (GATU): rapid annotation of viral genomes using a closely related reference genome.
    Tcherepanov V, Ehlers A, Upton C.
    BMC Genomics; 2006 Jun 13; 7():150. PubMed ID: 16772042
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  • 7. Cross-organism learning method to discover new gene functionalities.
    Domeniconi G, Masseroli M, Moro G, Pinoli P.
    Comput Methods Programs Biomed; 2016 Apr 13; 126():20-34. PubMed ID: 26724853
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  • 9. Beav: a bacterial genome and mobile element annotation pipeline.
    Jung JM, Rahman A, Schiffer AM, Weisberg AJ.
    mSphere; 2024 Aug 28; 9(8):e0020924. PubMed ID: 39037262
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  • 10. Protein Sequence Annotation Tool (PSAT): a centralized web-based meta-server for high-throughput sequence annotations.
    Leung E, Huang A, Cadag E, Montana A, Soliman JL, Zhou CL.
    BMC Bioinformatics; 2016 Jan 20; 17():43. PubMed ID: 26792120
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  • 11. Restauro-G: a rapid genome re-annotation system for comparative genomics.
    Tamaki S, Arakawa K, Kono N, Tomita M.
    Genomics Proteomics Bioinformatics; 2007 Feb 20; 5(1):53-8. PubMed ID: 17572364
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  • 12. High-throughput comparison, functional annotation, and metabolic modeling of plant genomes using the PlantSEED resource.
    Seaver SM, Gerdes S, Frelin O, Lerma-Ortiz C, Bradbury LM, Zallot R, Hasnain G, Niehaus TD, El Yacoubi B, Pasternak S, Olson R, Pusch G, Overbeek R, Stevens R, de Crécy-Lagard V, Ware D, Hanson AD, Henry CS.
    Proc Natl Acad Sci U S A; 2014 Jul 01; 111(26):9645-50. PubMed ID: 24927599
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  • 13. MICheck: a web tool for fast checking of syntactic annotations of bacterial genomes.
    Cruveiller S, Le Saux J, Vallenet D, Lajus A, Bocs S, Médigue C.
    Nucleic Acids Res; 2005 Jul 01; 33(Web Server issue):W471-9. PubMed ID: 15980515
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  • 14. GenColors: accelerated comparative analysis and annotation of prokaryotic genomes at various stages of completeness.
    Romualdi A, Siddiqui R, Glöckner G, Lehmann R, Sühnel J.
    Bioinformatics; 2005 Sep 15; 21(18):3669-71. PubMed ID: 16076887
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  • 15. Genix: a new online automated pipeline for bacterial genome annotation.
    Kremer FS, Eslabão MR, Dellagostin OA, Pinto LD.
    FEMS Microbiol Lett; 2016 Dec 15; 363(23):. PubMed ID: 27856568
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  • 16. VariOtator, a Software Tool for Variation Annotation with the Variation Ontology.
    Schaafsma GC, Vihinen M.
    Hum Mutat; 2016 Apr 15; 37(4):344-9. PubMed ID: 26773573
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  • 17. MycoBASE: expanding the functional annotation coverage of mycobacterial genomes.
    Garcia BJ, Datta G, Davidson RM, Strong M.
    BMC Genomics; 2015 Dec 24; 16():1102. PubMed ID: 26704706
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  • 18. AGeS: a software system for microbial genome sequence annotation.
    Kumar K, Desai V, Cheng L, Khitrov M, Grover D, Satya RV, Yu C, Zavaljevski N, Reifman J.
    PLoS One; 2011 Mar 07; 6(3):e17469. PubMed ID: 21408217
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  • 19. Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system.
    Chen IM, Markowitz VM, Palaniappan K, Szeto E, Chu K, Huang J, Ratner A, Pillay M, Hadjithomas M, Huntemann M, Mikhailova N, Ovchinnikova G, Ivanova NN, Kyrpides NC.
    BMC Genomics; 2016 Apr 26; 17():307. PubMed ID: 27118214
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  • 20. INDIGO - INtegrated data warehouse of microbial genomes with examples from the red sea extremophiles.
    Alam I, Antunes A, Kamau AA, Ba Alawi W, Kalkatawi M, Stingl U, Bajic VB.
    PLoS One; 2013 Apr 26; 8(12):e82210. PubMed ID: 24324765
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