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Journal Abstract Search

239 related items for PubMed ID: 26549015

  • 1. Deciphering Supramolecular Structures with Protein-Protein Interaction Network Modeling.
    Tsuji T, Yoda T, Shirai T.
    Sci Rep; 2015 Nov 09; 5():16341. PubMed ID: 26549015
    [Abstract] [Full Text] [Related]

  • 2. Identifying protein complexes and functional modules--from static PPI networks to dynamic PPI networks.
    Chen B, Fan W, Liu J, Wu FX.
    Brief Bioinform; 2014 Mar 09; 15(2):177-94. PubMed ID: 23780996
    [Abstract] [Full Text] [Related]

  • 3. Oligomerisation status and evolutionary conservation of interfaces of protein structural domain superfamilies.
    Sukhwal A, Sowdhamini R.
    Mol Biosyst; 2013 Jul 09; 9(7):1652-61. PubMed ID: 23532342
    [Abstract] [Full Text] [Related]

  • 4. Structural modeling of protein complexes: Current capabilities and challenges.
    Dapkūnas J, Olechnovič K, Venclovas Č.
    Proteins; 2019 Dec 09; 87(12):1222-1232. PubMed ID: 31294859
    [Abstract] [Full Text] [Related]

  • 5. Specificity of molecular interactions in transient protein-protein interaction interfaces.
    Cho KI, Lee K, Lee KH, Kim D, Lee D.
    Proteins; 2006 Nov 15; 65(3):593-606. PubMed ID: 16948160
    [Abstract] [Full Text] [Related]

  • 6. Linking structural features of protein complexes and biological function.
    Sowmya G, Breen EJ, Ranganathan S.
    Protein Sci; 2015 Sep 15; 24(9):1486-94. PubMed ID: 26131659
    [Abstract] [Full Text] [Related]

  • 7. Comprehensive inventory of protein complexes in the Protein Data Bank from consistent classification of interfaces.
    Bordner AJ, Gorin AA.
    BMC Bioinformatics; 2008 May 12; 9():234. PubMed ID: 18474114
    [Abstract] [Full Text] [Related]

  • 8. A multiscale approach to predicting affinity changes in protein-protein interfaces.
    Dourado DF, Flores SC.
    Proteins; 2014 Oct 12; 82(10):2681-90. PubMed ID: 24975440
    [Abstract] [Full Text] [Related]

  • 9. Modeling and analyzing three-dimensional structures of human disease proteins.
    Ye Y, Li Z, Godzik A.
    Pac Symp Biocomput; 2006 Oct 12; ():439-50. PubMed ID: 17094259
    [Abstract] [Full Text] [Related]

  • 10. Interactome3D: adding structural details to protein networks.
    Mosca R, Céol A, Aloy P.
    Nat Methods; 2013 Jan 12; 10(1):47-53. PubMed ID: 23399932
    [Abstract] [Full Text] [Related]

  • 11. Mining the characteristic interaction patterns on protein-protein binding interfaces.
    Li Y, Liu Z, Han L, Li C, Wang R.
    J Chem Inf Model; 2013 Sep 23; 53(9):2437-47. PubMed ID: 23930922
    [Abstract] [Full Text] [Related]

  • 12. Protein complex compositions predicted by structural similarity.
    Davis FP, Braberg H, Shen MY, Pieper U, Sali A, Madhusudhan MS.
    Nucleic Acids Res; 2006 Sep 23; 34(10):2943-52. PubMed ID: 16738133
    [Abstract] [Full Text] [Related]

  • 13. Three-dimensional modeling of protein interactions and complexes is going 'omics.
    Stein A, Mosca R, Aloy P.
    Curr Opin Struct Biol; 2011 Apr 23; 21(2):200-8. PubMed ID: 21320770
    [Abstract] [Full Text] [Related]

  • 14. Chemical cross-linking and mass spectrometry to determine the subunit interaction network in a recombinant human SAGA HAT subcomplex.
    Nguyen-Huynh NT, Sharov G, Potel C, Fichter P, Trowitzsch S, Berger I, Lamour V, Schultz P, Potier N, Leize-Wagner E.
    Protein Sci; 2015 Aug 23; 24(8):1232-46. PubMed ID: 25753033
    [Abstract] [Full Text] [Related]

  • 15. Protein complexes and interaction networks.
    Gingras AC, Nesvizhskii A.
    Proteomics; 2012 May 23; 12(10):1475-7. PubMed ID: 22711591
    [No Abstract] [Full Text] [Related]

  • 16. A least square method based model for identifying protein complexes in protein-protein interaction network.
    Dai Q, Guo M, Guo Y, Liu X, Liu Y, Teng Z.
    Biomed Res Int; 2014 May 23; 2014():720960. PubMed ID: 25405206
    [Abstract] [Full Text] [Related]

  • 17. Large macromolecular complexes in the Protein Data Bank: a status report.
    Dutta S, Berman HM.
    Structure; 2005 Mar 23; 13(3):381-8. PubMed ID: 15766539
    [Abstract] [Full Text] [Related]

  • 18. Modeling oligomers with Cn or Dn symmetry: application to CAPRI target 10.
    Berchanski A, Segal D, Eisenstein M.
    Proteins; 2005 Aug 01; 60(2):202-6. PubMed ID: 15981250
    [Abstract] [Full Text] [Related]

  • 19. Homology-based modeling of 3D structures of protein-protein complexes using alignments of modified sequence profiles.
    Kundrotas PJ, Lensink MF, Alexov E.
    Int J Biol Macromol; 2008 Aug 15; 43(2):198-208. PubMed ID: 18572239
    [Abstract] [Full Text] [Related]

  • 20. Usefulness and limitations of normal mode analysis in modeling dynamics of biomolecular complexes.
    Ma J.
    Structure; 2005 Mar 15; 13(3):373-80. PubMed ID: 15766538
    [Abstract] [Full Text] [Related]

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