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Journal Abstract Search

226 related items for PubMed ID: 26709718

  • 1. Protein complex analysis: From raw protein lists to protein interaction networks.
    Meysman P, Titeca K, Eyckerman S, Tavernier J, Goethals B, Martens L, Valkenborg D, Laukens K.
    Mass Spectrom Rev; 2017 Sep; 36(5):600-614. PubMed ID: 26709718
    [Abstract] [Full Text] [Related]

  • 2. From pull-down data to protein interaction networks and complexes with biological relevance.
    Zhang B, Park BH, Karpinets T, Samatova NF.
    Bioinformatics; 2008 Apr 01; 24(7):979-86. PubMed ID: 18304937
    [Abstract] [Full Text] [Related]

  • 3. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
    Xu B, Guan J.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Apr 01; 11(4):616-27. PubMed ID: 26356332
    [Abstract] [Full Text] [Related]

  • 4. Detection of protein complexes from affinity purification/mass spectrometry data.
    Cai B, Wang H, Zheng H, Wang H.
    BMC Syst Biol; 2012 Apr 01; 6 Suppl 3(Suppl 3):S4. PubMed ID: 23282282
    [Abstract] [Full Text] [Related]

  • 5. A Type-2 fuzzy data fusion approach for building reliable weighted protein interaction networks with application in protein complex detection.
    Mehranfar A, Ghadiri N, Kouhsar M, Golshani A.
    Comput Biol Med; 2017 Sep 01; 88():18-31. PubMed ID: 28672176
    [Abstract] [Full Text] [Related]

  • 6. An analysis pipeline for the inference of protein-protein interaction networks.
    Taylor RC, Singhal M, Daly DS, Gilmore J, Cannon WR, Domico K, White AM, Auberry DL, Auberry KJ, Hooker BS, Hurst G, McDermott JE, McDonald WH, Pelletier DA, Schmoyer D, Wiley HS.
    Int J Data Min Bioinform; 2009 Sep 01; 3(4):409-30. PubMed ID: 20052905
    [Abstract] [Full Text] [Related]

  • 7. Recent advances in charting protein-protein interaction: mass spectrometry-based approaches.
    Gavin AC, Maeda K, Kühner S.
    Curr Opin Biotechnol; 2011 Feb 01; 22(1):42-9. PubMed ID: 20934865
    [Abstract] [Full Text] [Related]

  • 8. Protein complexes and interaction networks.
    Gingras AC, Nesvizhskii A.
    Proteomics; 2012 May 01; 12(10):1475-7. PubMed ID: 22711591
    [No Abstract] [Full Text] [Related]

  • 9. A novel scoring approach for protein co-purification data reveals high interaction specificity.
    Yu X, Ivanic J, Wallqvist A, Reifman J.
    PLoS Comput Biol; 2009 Sep 01; 5(9):e1000515. PubMed ID: 19779545
    [Abstract] [Full Text] [Related]

  • 10. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
    Yu L, Gao L, Li K, Zhao Y, Chiu DK.
    Comput Biol Chem; 2011 Oct 12; 35(5):298-307. PubMed ID: 22000801
    [Abstract] [Full Text] [Related]

  • 11. A sampling framework for incorporating quantitative mass spectrometry data in protein interaction analysis.
    Tucker G, Loh PR, Berger B.
    BMC Bioinformatics; 2013 Oct 04; 14():299. PubMed ID: 24093595
    [Abstract] [Full Text] [Related]

  • 12. Protein-Protein Interaction Detection Via Mass Spectrometry-Based Proteomics.
    Turriziani B, von Kriegsheim A, Pennington SR.
    Adv Exp Med Biol; 2016 Oct 04; 919():383-396. PubMed ID: 27975227
    [Abstract] [Full Text] [Related]

  • 13. A density-based clustering approach for identifying overlapping protein complexes with functional preferences.
    Hu L, Chan KC.
    BMC Bioinformatics; 2015 May 27; 16():174. PubMed ID: 26013799
    [Abstract] [Full Text] [Related]

  • 14. Identifying protein complexes and functional modules--from static PPI networks to dynamic PPI networks.
    Chen B, Fan W, Liu J, Wu FX.
    Brief Bioinform; 2014 Mar 27; 15(2):177-94. PubMed ID: 23780996
    [Abstract] [Full Text] [Related]

  • 15. The impact of protein interaction networks' characteristics on computational complex detection methods.
    Liu X, Yang Z, Zhou Z, Sun Y, Lin H, Wang J, Xu B.
    J Theor Biol; 2018 Feb 14; 439():141-151. PubMed ID: 29217484
    [Abstract] [Full Text] [Related]

  • 16. A survey of computational methods for protein complex prediction from protein interaction networks.
    Srihari S, Leong HW.
    J Bioinform Comput Biol; 2013 Apr 14; 11(2):1230002. PubMed ID: 23600810
    [Abstract] [Full Text] [Related]

  • 17. Bioinformatics Analysis of PTM-Modified Protein Interaction Networks and Complexes.
    Woodsmith J, Stelzl U, Vinayagam A.
    Methods Mol Biol; 2017 Apr 14; 1558():321-332. PubMed ID: 28150245
    [Abstract] [Full Text] [Related]

  • 18. A new multi-scale method to reveal hierarchical modular structures in biological networks.
    Jiao QJ, Huang Y, Shen HB.
    Mol Biosyst; 2016 Nov 15; 12(12):3724-3733. PubMed ID: 27783080
    [Abstract] [Full Text] [Related]

  • 19. An effective approach to detecting both small and large complexes from protein-protein interaction networks.
    Xu B, Wang Y, Wang Z, Zhou J, Zhou S, Guan J.
    BMC Bioinformatics; 2017 Oct 16; 18(Suppl 12):419. PubMed ID: 29072136
    [Abstract] [Full Text] [Related]

  • 20. Popular computational methods to assess multiprotein complexes derived from label-free affinity purification and mass spectrometry (AP-MS) experiments.
    Armean IM, Lilley KS, Trotter MW.
    Mol Cell Proteomics; 2013 Jan 16; 12(1):1-13. PubMed ID: 23071097
    [Abstract] [Full Text] [Related]

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