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174 related items for PubMed ID: 26871271

  • 1. Epigenetic regulation of subgenome dominance following whole genome triplication in Brassica rapa.
    Cheng F, Sun C, Wu J, Schnable J, Woodhouse MR, Liang J, Cai C, Freeling M, Wang X.
    New Phytol; 2016 Jul; 211(1):288-99. PubMed ID: 26871271
    [Abstract] [Full Text] [Related]

  • 2. The lack of negative association between TE load and subgenome dominance in synthesized Brassica allotetraploids.
    Zhang K, Zhang L, Cui Y, Yang Y, Wu J, Liang J, Li X, Zhang X, Zhang Y, Guo Z, Zhang L, Chen S, Ruan J, Freeling M, Wang X, Cheng F.
    Proc Natl Acad Sci U S A; 2023 Oct 17; 120(42):e2305208120. PubMed ID: 37816049
    [Abstract] [Full Text] [Related]

  • 3. Replaying the evolutionary tape to investigate subgenome dominance in allopolyploid Brassica napus.
    Bird KA, Niederhuth CE, Ou S, Gehan M, Pires JC, Xiong Z, VanBuren R, Edger PP.
    New Phytol; 2021 Apr 17; 230(1):354-371. PubMed ID: 33280122
    [Abstract] [Full Text] [Related]

  • 4. Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica oleracea.
    Cheng F, Sun R, Hou X, Zheng H, Zhang F, Zhang Y, Liu B, Liang J, Zhuang M, Liu Y, Liu D, Wang X, Li P, Liu Y, Lin K, Bucher J, Zhang N, Wang Y, Wang H, Deng J, Liao Y, Wei K, Zhang X, Fu L, Hu Y, Liu J, Cai C, Zhang S, Zhang S, Li F, Zhang H, Zhang J, Guo N, Liu Z, Liu J, Sun C, Ma Y, Zhang H, Cui Y, Freeling MR, Borm T, Bonnema G, Wu J, Wang X.
    Nat Genet; 2016 Oct 17; 48(10):1218-24. PubMed ID: 27526322
    [Abstract] [Full Text] [Related]

  • 5. Genomic asymmetric epigenetic modification of transposable elements is involved in gene expression regulation of allopolyploid Brassica napus.
    Xiao Y, Xi Z, Wang F, Wang J.
    Plant J; 2024 Jan 17; 117(1):226-241. PubMed ID: 37797206
    [Abstract] [Full Text] [Related]

  • 6. Subgenome dominance and its evolutionary implications in crop domestication and breeding.
    Wang Z, Yang J, Cheng F, Li P, Xin X, Wang W, Yu Y, Zhang D, Zhao X, Yu S, Zhang F, Dong Y, Su T.
    Hortic Res; 2022 Jan 17; 9():uhac090. PubMed ID: 35873727
    [Abstract] [Full Text] [Related]

  • 7. One subgenome to rule them all: underlying mechanisms of subgenome dominance.
    Alger EI, Edger PP.
    Curr Opin Plant Biol; 2020 Apr 17; 54():108-113. PubMed ID: 32344327
    [Abstract] [Full Text] [Related]

  • 8. The causes and consequences of subgenome dominance in hybrids and recent polyploids.
    Bird KA, VanBuren R, Puzey JR, Edger PP.
    New Phytol; 2018 Oct 17; 220(1):87-93. PubMed ID: 29882360
    [Abstract] [Full Text] [Related]

  • 9. Impacts of Whole-Genome Triplication on MIRNA Evolution in Brassica rapa.
    Sun C, Wu J, Liang J, Schnable JC, Yang W, Cheng F, Wang X.
    Genome Biol Evol; 2015 Nov 01; 7(11):3085-96. PubMed ID: 26527651
    [Abstract] [Full Text] [Related]

  • 10. Altered patterns of fractionation and exon deletions in Brassica rapa support a two-step model of paleohexaploidy.
    Tang H, Woodhouse MR, Cheng F, Schnable JC, Pedersen BS, Conant G, Wang X, Freeling M, Pires JC.
    Genetics; 2012 Apr 01; 190(4):1563-74. PubMed ID: 22308264
    [Abstract] [Full Text] [Related]

  • 11. Biased gene fractionation and dominant gene expression among the subgenomes of Brassica rapa.
    Cheng F, Wu J, Fang L, Sun S, Liu B, Lin K, Bonnema G, Wang X.
    PLoS One; 2012 Apr 01; 7(5):e36442. PubMed ID: 22567157
    [Abstract] [Full Text] [Related]

  • 12. Genomic asymmetry of the Brassica napus seed: epigenetic contributions of DNA methylation and small RNAs to subgenome bias.
    Ziegler DJ, Khan D, Pulgar-Vidal N, Parkin IAP, Robinson SJ, Belmonte MF.
    Plant J; 2023 Aug 01; 115(3):690-708. PubMed ID: 37195091
    [Abstract] [Full Text] [Related]

  • 13. DNA methylation role in subgenome expression dominance of Juglans regia and its wild relative J. mandshurica.
    Li M, Ou M, He X, Ye H, Ma J, Liu H, Yang H, Zhao P.
    Plant Physiol; 2023 Sep 22; 193(2):1313-1329. PubMed ID: 37403190
    [Abstract] [Full Text] [Related]

  • 14. Origin, inheritance, and gene regulatory consequences of genome dominance in polyploids.
    Woodhouse MR, Cheng F, Pires JC, Lisch D, Freeling M, Wang X.
    Proc Natl Acad Sci U S A; 2014 Apr 08; 111(14):5283-8. PubMed ID: 24706847
    [Abstract] [Full Text] [Related]

  • 15. Extraction of the Constituent Subgenomes of the Natural Allopolyploid Rapeseed (Brassica napus L.).
    Zhu B, Tu Y, Zeng P, Ge X, Li Z.
    Genetics; 2016 Nov 08; 204(3):1015-1027. PubMed ID: 27638420
    [Abstract] [Full Text] [Related]

  • 16. Impacts of allopolyploidization and structural variation on intraspecific diversification in Brassica rapa.
    Cai X, Chang L, Zhang T, Chen H, Zhang L, Lin R, Liang J, Wu J, Freeling M, Wang X.
    Genome Biol; 2021 May 31; 22(1):166. PubMed ID: 34059118
    [Abstract] [Full Text] [Related]

  • 17. [Transposon expression and potential effects on gene regulation of Brassica rapa and B. oleracea genomes].
    Zhao MX, Zhang B, Liu SY, Ma JX.
    Yi Chuan; 2013 Aug 31; 35(8):1014-22. PubMed ID: 23956090
    [Abstract] [Full Text] [Related]

  • 18. Subgenome Dominance in an Interspecific Hybrid, Synthetic Allopolyploid, and a 140-Year-Old Naturally Established Neo-Allopolyploid Monkeyflower.
    Edger PP, Smith R, McKain MR, Cooley AM, Vallejo-Marin M, Yuan Y, Bewick AJ, Ji L, Platts AE, Bowman MJ, Childs KL, Washburn JD, Schmitz RJ, Smith GD, Pires JC, Puzey JR.
    Plant Cell; 2017 Sep 31; 29(9):2150-2167. PubMed ID: 28814644
    [Abstract] [Full Text] [Related]

  • 19. Patterns of evolutionary conservation of ascorbic acid-related genes following whole-genome triplication in Brassica rapa.
    Duan W, Song X, Liu T, Huang Z, Ren J, Hou X, Du J, Li Y.
    Genome Biol Evol; 2014 Dec 31; 7(1):299-313. PubMed ID: 25552535
    [Abstract] [Full Text] [Related]

  • 20. Analysis of CACTA transposase genes unveils the mechanism of intron loss and distinct small RNA silencing pathways underlying divergent evolution of Brassica genomes.
    Liu B, Iwata-Otsubo A, Yang D, Baker RL, Liang C, Jackson SA, Liu S, Ma J, Zhao M.
    Plant J; 2021 Jan 31; 105(1):34-48. PubMed ID: 33098166
    [Abstract] [Full Text] [Related]

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