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247 related items for PubMed ID: 26894748

  • 1. Inferring Neuronal Dynamics from Calcium Imaging Data Using Biophysical Models and Bayesian Inference.
    Rahmati V, Kirmse K, Marković D, Holthoff K, Kiebel SJ.
    PLoS Comput Biol; 2016 Feb; 12(2):e1004736. PubMed ID: 26894748
    [Abstract] [Full Text] [Related]

  • 2. Ultra-fast accurate reconstruction of spiking activity from calcium imaging data.
    Rahmati V, Kirmse K, Holthoff K, Kiebel SJ.
    J Neurophysiol; 2018 May 01; 119(5):1863-1878. PubMed ID: 29465325
    [Abstract] [Full Text] [Related]

  • 3. Inference of neuronal network spike dynamics and topology from calcium imaging data.
    Lütcke H, Gerhard F, Zenke F, Gerstner W, Helmchen F.
    Front Neural Circuits; 2013 May 01; 7():201. PubMed ID: 24399936
    [Abstract] [Full Text] [Related]

  • 4. Optimized temporally deconvolved Ca²⁺ imaging allows identification of spatiotemporal activity patterns of CA1 hippocampal ensembles.
    Pfeiffer T, Draguhn A, Reichinnek S, Both M.
    Neuroimage; 2014 Jul 01; 94():239-249. PubMed ID: 24650598
    [Abstract] [Full Text] [Related]

  • 5. Direct extraction of signal and noise correlations from two-photon calcium imaging of ensemble neuronal activity.
    Rupasinghe A, Francis N, Liu J, Bowen Z, Kanold PO, Babadi B.
    Elife; 2021 Jun 28; 10():. PubMed ID: 34180397
    [Abstract] [Full Text] [Related]

  • 6. To deconvolve, or not to deconvolve: Inferences of neuronal activities using calcium imaging data.
    Shen T, Lur G, Xu X, Yu Z.
    J Neurosci Methods; 2022 Jan 15; 366():109431. PubMed ID: 34856319
    [Abstract] [Full Text] [Related]

  • 7. Empirical Bayesian significance measure of neuronal spike response.
    Oba S, Nakae K, Ikegaya Y, Aki S, Yoshimoto J, Ishii S.
    BMC Neurosci; 2016 May 21; 17(1):27. PubMed ID: 27209433
    [Abstract] [Full Text] [Related]

  • 8. Blind deconvolution for spike inference from fluorescence recordings.
    Tubiana J, Wolf S, Panier T, Debregeas G.
    J Neurosci Methods; 2020 Aug 01; 342():108763. PubMed ID: 32479972
    [Abstract] [Full Text] [Related]

  • 9. Quantifying bursting neuron activity from calcium signals using blind deconvolution.
    Park IJ, Bobkov YV, Ache BW, Principe JC.
    J Neurosci Methods; 2013 Sep 15; 218(2):196-205. PubMed ID: 23711821
    [Abstract] [Full Text] [Related]

  • 10. Benchmarking Spike Rate Inference in Population Calcium Imaging.
    Theis L, Berens P, Froudarakis E, Reimer J, Román Rosón M, Baden T, Euler T, Tolias AS, Bethge M.
    Neuron; 2016 May 04; 90(3):471-82. PubMed ID: 27151639
    [Abstract] [Full Text] [Related]

  • 11. A comparison of neuronal population dynamics measured with calcium imaging and electrophysiology.
    Wei Z, Lin BJ, Chen TW, Daie K, Svoboda K, Druckmann S.
    PLoS Comput Biol; 2020 Sep 04; 16(9):e1008198. PubMed ID: 32931495
    [Abstract] [Full Text] [Related]

  • 12. Robustness of Spike Deconvolution for Neuronal Calcium Imaging.
    Pachitariu M, Stringer C, Harris KD.
    J Neurosci; 2018 Sep 12; 38(37):7976-7985. PubMed ID: 30082416
    [Abstract] [Full Text] [Related]

  • 13. High-speed in vivo calcium imaging reveals neuronal network activity with near-millisecond precision.
    Grewe BF, Langer D, Kasper H, Kampa BM, Helmchen F.
    Nat Methods; 2010 May 12; 7(5):399-405. PubMed ID: 20400966
    [Abstract] [Full Text] [Related]

  • 14. Spike inference from calcium imaging using sequential Monte Carlo methods.
    Vogelstein JT, Watson BO, Packer AM, Yuste R, Jedynak B, Paninski L.
    Biophys J; 2009 Jul 22; 97(2):636-55. PubMed ID: 19619479
    [Abstract] [Full Text] [Related]

  • 15. Inferring spikes from calcium imaging in dopamine neurons.
    Fleming W, Jewell S, Engelhard B, Witten DM, Witten IB.
    PLoS One; 2021 Jul 22; 16(6):e0252345. PubMed ID: 34086726
    [Abstract] [Full Text] [Related]

  • 16. Accurate spike estimation from noisy calcium signals for ultrafast three-dimensional imaging of large neuronal populations in vivo.
    Deneux T, Kaszas A, Szalay G, Katona G, Lakner T, Grinvald A, Rózsa B, Vanzetta I.
    Nat Commun; 2016 Jul 19; 7():12190. PubMed ID: 27432255
    [Abstract] [Full Text] [Related]

  • 17. Calcium Imaging and the Curse of Negativity.
    Vanwalleghem G, Constantin L, Scott EK.
    Front Neural Circuits; 2020 Jul 19; 14():607391. PubMed ID: 33488363
    [Abstract] [Full Text] [Related]

  • 18. Optical recording of neuronal spiking activity from unbiased populations of neurons with high spike detection efficiency and high temporal precision.
    Ranganathan GN, Koester HJ.
    J Neurophysiol; 2010 Sep 19; 104(3):1812-24. PubMed ID: 20610791
    [Abstract] [Full Text] [Related]

  • 19. A finite rate of innovation algorithm for fast and accurate spike detection from two-photon calcium imaging.
    Oñativia J, Schultz SR, Dragotti PL.
    J Neural Eng; 2013 Aug 19; 10(4):046017. PubMed ID: 23860257
    [Abstract] [Full Text] [Related]

  • 20. Deconvolution of calcium imaging data using marked point processes.
    Shibue R, Komaki F.
    PLoS Comput Biol; 2020 Mar 19; 16(3):e1007650. PubMed ID: 32163407
    [Abstract] [Full Text] [Related]

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