These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

228 related items for PubMed ID: 26932273

  • 1. An efficient algorithm for planar drawing of RNA structures with pseudoknots of any type.
    Byun Y, Han K.
    J Bioinform Comput Biol; 2016 Jun; 14(3):1650009. PubMed ID: 26932273
    [Abstract] [Full Text] [Related]

  • 2. PSEUDOVIEWER2: Visualization of RNA pseudoknots of any type.
    Han K, Byun Y.
    Nucleic Acids Res; 2003 Jul 01; 31(13):3432-40. PubMed ID: 12824341
    [Abstract] [Full Text] [Related]

  • 3. PseudoViewer: automatic visualization of RNA pseudoknots.
    Han K, Lee Y, Kim W.
    Bioinformatics; 2002 Jul 01; 18 Suppl 1():S321-8. PubMed ID: 12169562
    [Abstract] [Full Text] [Related]

  • 4. PseudoViewer3: generating planar drawings of large-scale RNA structures with pseudoknots.
    Byun Y, Han K.
    Bioinformatics; 2009 Jun 01; 25(11):1435-7. PubMed ID: 19369500
    [Abstract] [Full Text] [Related]

  • 5. Pair stochastic tree adjoining grammars for aligning and predicting pseudoknot RNA structures.
    Matsui H, Sato K, Sakakibara Y.
    Proc IEEE Comput Syst Bioinform Conf; 2004 Jun 01; ():290-9. PubMed ID: 16448022
    [Abstract] [Full Text] [Related]

  • 6. jViz.RNA 4.0-Visualizing pseudoknots and RNA editing employing compressed tree graphs.
    Shabash B, Wiese KC.
    PLoS One; 2019 Jun 01; 14(5):e0210281. PubMed ID: 31059508
    [Abstract] [Full Text] [Related]

  • 7. Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics.
    Reeder J, Giegerich R.
    BMC Bioinformatics; 2004 Aug 04; 5():104. PubMed ID: 15294028
    [Abstract] [Full Text] [Related]

  • 8. PseudoViewer: web application and web service for visualizing RNA pseudoknots and secondary structures.
    Byun Y, Han K.
    Nucleic Acids Res; 2006 Jul 01; 34(Web Server issue):W416-22. PubMed ID: 16845039
    [Abstract] [Full Text] [Related]

  • 9. DotKnot: pseudoknot prediction using the probability dot plot under a refined energy model.
    Sperschneider J, Datta A.
    Nucleic Acids Res; 2010 Apr 01; 38(7):e103. PubMed ID: 20123730
    [Abstract] [Full Text] [Related]

  • 10. Predicting RNA secondary structures with arbitrary pseudoknots by maximizing the number of stacking pairs.
    Ieong S, Kao MY, Lam TW, Sung WK, Yiu SM.
    J Comput Biol; 2003 Apr 01; 10(6):981-95. PubMed ID: 14980021
    [Abstract] [Full Text] [Related]

  • 11. The language of RNA: a formal grammar that includes pseudoknots.
    Rivas E, Eddy SR.
    Bioinformatics; 2000 Apr 01; 16(4):334-40. PubMed ID: 10869031
    [Abstract] [Full Text] [Related]

  • 12. Pair stochastic tree adjoining grammars for aligning and predicting pseudoknot RNA structures.
    Matsui H, Sato K, Sakakibara Y.
    Bioinformatics; 2005 Jun 01; 21(11):2611-7. PubMed ID: 15784748
    [Abstract] [Full Text] [Related]

  • 13. A procedure for RNA pseudoknot prediction.
    Chen JH, Le SY, Maizel JV.
    Comput Appl Biosci; 1992 Jun 01; 8(3):243-8. PubMed ID: 1378773
    [Abstract] [Full Text] [Related]

  • 14. HotKnots: heuristic prediction of RNA secondary structures including pseudoknots.
    Ren J, Rastegari B, Condon A, Hoos HH.
    RNA; 2005 Oct 01; 11(10):1494-504. PubMed ID: 16199760
    [Abstract] [Full Text] [Related]

  • 15. Pseudoknots in RNA secondary structures: representation, enumeration, and prevalence.
    Rødland EA.
    J Comput Biol; 2006 Oct 01; 13(6):1197-213. PubMed ID: 16901237
    [Abstract] [Full Text] [Related]

  • 16. RNA2Drawer: geometrically strict drawing of nucleic acid structures with graphical structure editing and highlighting of complementary subsequences.
    Johnson PZ, Kasprzak WK, Shapiro BA, Simon AE.
    RNA Biol; 2019 Dec 01; 16(12):1667-1671. PubMed ID: 31441369
    [Abstract] [Full Text] [Related]

  • 17. Novel and efficient RNA secondary structure prediction using hierarchical folding.
    Jabbari H, Condon A, Zhao S.
    J Comput Biol; 2008 Mar 01; 15(2):139-63. PubMed ID: 18312147
    [Abstract] [Full Text] [Related]

  • 18. Structure of the autoregulatory pseudoknot within the gene 32 messenger RNA of bacteriophages T2 and T6: a model for a possible family of structurally related RNA pseudoknots.
    Du Z, Giedroc DP, Hoffman DW.
    Biochemistry; 1996 Apr 02; 35(13):4187-98. PubMed ID: 8672455
    [Abstract] [Full Text] [Related]

  • 19. Rapid ab initio prediction of RNA pseudoknots via graph tree decomposition.
    Zhao J, Malmberg RL, Cai L.
    J Math Biol; 2008 Jan 02; 56(1-2):145-59. PubMed ID: 17906862
    [Abstract] [Full Text] [Related]

  • 20. A dynamic programming algorithm for RNA structure prediction including pseudoknots.
    Rivas E, Eddy SR.
    J Mol Biol; 1999 Feb 05; 285(5):2053-68. PubMed ID: 9925784
    [Abstract] [Full Text] [Related]

    Page: [Next] [New Search]
    of 12.