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Journal Abstract Search

171 related items for PubMed ID: 27100396

  • 21. The relative vertex clustering value--a new criterion for the fast discovery of functional modules in protein interaction networks.
    Ibrahim ZM, Ngom A.
    BMC Bioinformatics; 2015; 16 Suppl 4(Suppl 4):S3. PubMed ID: 25734691
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  • 22. Denoising Protein-Protein interaction network via variational graph auto-encoder for protein complex detection.
    Yao H, Guan J, Liu T.
    J Bioinform Comput Biol; 2020 Jun; 18(3):2040010. PubMed ID: 32698725
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  • 23. Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering.
    Theofilatos K, Pavlopoulou N, Papasavvas C, Likothanassis S, Dimitrakopoulos C, Georgopoulos E, Moschopoulos C, Mavroudi S.
    Artif Intell Med; 2015 Mar; 63(3):181-9. PubMed ID: 25765008
    [Abstract] [Full Text] [Related]

  • 24. A novel protein complex identification algorithm based on Connected Affinity Clique Extension (CACE).
    Li P, He T, Hu X, Zhao J, Shen X, Zhang M, Wang Y.
    IEEE Trans Nanobioscience; 2014 Jun; 13(2):89-96. PubMed ID: 24803142
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  • 25. A fast hierarchical clustering algorithm for functional modules discovery in protein interaction networks.
    Wang J, Li M, Chen J, Pan Y.
    IEEE/ACM Trans Comput Biol Bioinform; 2011 Jun; 8(3):607-20. PubMed ID: 20733244
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  • 26. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
    Ou-Yang L, Yan H, Zhang XF.
    BMC Bioinformatics; 2017 Dec 01; 18(Suppl 13):463. PubMed ID: 29219066
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  • 27. A Type-2 fuzzy data fusion approach for building reliable weighted protein interaction networks with application in protein complex detection.
    Mehranfar A, Ghadiri N, Kouhsar M, Golshani A.
    Comput Biol Med; 2017 Sep 01; 88():18-31. PubMed ID: 28672176
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  • 28. An uncertain model-based approach for identifying dynamic protein complexes in uncertain protein-protein interaction networks.
    Zhang Y, Lin H, Yang Z, Wang J, Liu Y.
    BMC Genomics; 2017 Oct 16; 18(Suppl 7):743. PubMed ID: 29513194
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  • 29. A protein network refinement method based on module discovery and biological information.
    Pan L, Wang H, Yang B, Li W.
    BMC Bioinformatics; 2024 Apr 20; 25(1):157. PubMed ID: 38643108
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  • 30. Detecting protein complexes with multiple properties by an adaptive harmony search algorithm.
    Wang R, Wang C, Ma H.
    BMC Bioinformatics; 2022 Oct 07; 23(1):414. PubMed ID: 36207692
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  • 31. An efficient protein complex mining algorithm based on Multistage Kernel Extension.
    Shen X, Zhao Y, Li Y, He T, Yang J, Hu X.
    BMC Bioinformatics; 2014 Oct 07; 15 Suppl 12(Suppl 12):S7. PubMed ID: 25474367
    [Abstract] [Full Text] [Related]

  • 32. Identification of human protein complexes from local sub-graphs of protein-protein interaction network based on random forest with topological structure features.
    Li ZC, Lai YH, Chen LL, Zhou X, Dai Z, Zou XY.
    Anal Chim Acta; 2012 Mar 09; 718():32-41. PubMed ID: 22305895
    [Abstract] [Full Text] [Related]

  • 33. Neighbor Affinity-Based Core-Attachment Method to Detect Protein Complexes in Dynamic PPI Networks.
    Lei X, Liang J.
    Molecules; 2017 Jul 24; 22(7):. PubMed ID: 28737728
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  • 34. Accurately Detecting Protein Complexes by Graph Embedding and Combining Functions with Interactions.
    Yao H, Shi Y, Guan J, Zhou S.
    IEEE/ACM Trans Comput Biol Bioinform; 2020 Jul 24; 17(3):777-787. PubMed ID: 30736004
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  • 35. Detection of Protein Complexes Based on Penalized Matrix Decomposition in a Sparse Protein⁻Protein Interaction Network.
    Cao B, Deng S, Qin H, Ding P, Chen S, Li G.
    Molecules; 2018 Jun 15; 23(6):. PubMed ID: 29914123
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  • 36. Pin-Align: a new dynamic programming approach to align protein-protein interaction networks.
    Amir-Ghiasvand F, Nowzari-Dalini A, Momenzadeh V.
    Comput Math Methods Med; 2014 Jun 15; 2014():393908. PubMed ID: 25435900
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  • 37. CACO: A Core-Attachment Method With Cross-Species Functional Ortholog Information to Detect Human Protein Complexes.
    Wang W, Meng X, Xiang J, Shuai Y, Bedru HD, Li M.
    IEEE J Biomed Health Inform; 2023 Sep 15; 27(9):4569-4578. PubMed ID: 37399160
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  • 38. CPredictor3.0: detecting protein complexes from PPI networks with expression data and functional annotations.
    Xu Y, Zhou J, Zhou S, Guan J.
    BMC Syst Biol; 2017 Dec 21; 11(Suppl 7):135. PubMed ID: 29322927
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  • 39. Finding low-conductance sets with dense interactions (FLCD) for better protein complex prediction.
    Wang Y, Qian X.
    BMC Syst Biol; 2017 Mar 14; 11(Suppl 3):22. PubMed ID: 28361714
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  • 40. Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks.
    Liu X, Yang Z, Sang S, Zhou Z, Wang L, Zhang Y, Lin H, Wang J, Xu B.
    BMC Bioinformatics; 2018 Sep 21; 19(1):332. PubMed ID: 30241459
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