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Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

1799 related items for PubMed ID: 27166375

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  • 3. ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information.
    Glaser F, Pupko T, Paz I, Bell RE, Bechor-Shental D, Martz E, Ben-Tal N.
    Bioinformatics; 2003 Jan; 19(1):163-4. PubMed ID: 12499312
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  • 4. ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids.
    Ashkenazy H, Erez E, Martz E, Pupko T, Ben-Tal N.
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W529-33. PubMed ID: 20478830
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  • 5. The ConSurf-DB: pre-calculated evolutionary conservation profiles of protein structures.
    Goldenberg O, Erez E, Nimrod G, Ben-Tal N.
    Nucleic Acids Res; 2009 Jan; 37(Database issue):D323-7. PubMed ID: 18971256
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  • 7. Using evolutionary data to make sense of macromolecules with a "face-lifted" ConSurf.
    Yariv B, Yariv E, Kessel A, Masrati G, Chorin AB, Martz E, Mayrose I, Pupko T, Ben-Tal N.
    Protein Sci; 2023 Mar; 32(3):e4582. PubMed ID: 36718848
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  • 9. ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures.
    Landau M, Mayrose I, Rosenberg Y, Glaser F, Martz E, Pupko T, Ben-Tal N.
    Nucleic Acids Res; 2005 Jul 01; 33(Web Server issue):W299-302. PubMed ID: 15980475
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  • 10. Dali server update.
    Holm L, Laakso LM.
    Nucleic Acids Res; 2016 Jul 08; 44(W1):W351-5. PubMed ID: 27131377
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  • 12. W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis.
    Trifinopoulos J, Nguyen LT, von Haeseler A, Minh BQ.
    Nucleic Acids Res; 2016 Jul 08; 44(W1):W232-5. PubMed ID: 27084950
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  • 13. DIAL: a web server for the pairwise alignment of two RNA three-dimensional structures using nucleotide, dihedral angle and base-pairing similarities.
    Ferrè F, Ponty Y, Lorenz WA, Clote P.
    Nucleic Acids Res; 2007 Jul 08; 35(Web Server issue):W659-68. PubMed ID: 17567620
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  • 14. The RNAz web server: prediction of thermodynamically stable and evolutionarily conserved RNA structures.
    Gruber AR, Neuböck R, Hofacker IL, Washietl S.
    Nucleic Acids Res; 2007 Jul 08; 35(Web Server issue):W335-8. PubMed ID: 17452347
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  • 15. MAGOS: multiple alignment and modelling server.
    Garnier N, Friedrich A, Bolze R, Bettler E, Moulinier L, Geourjon C, Thompson JD, Deléage G, Poch O.
    Bioinformatics; 2006 Sep 01; 22(17):2164-5. PubMed ID: 16820425
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  • 16. Bayesian coestimation of phylogeny and sequence alignment.
    Lunter G, Miklós I, Drummond A, Jensen JL, Hein J.
    BMC Bioinformatics; 2005 Apr 01; 6():83. PubMed ID: 15804354
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  • 17. Correlation and prediction of gene expression level from amino acid and dipeptide composition of its protein.
    Raghava GP, Han JH.
    BMC Bioinformatics; 2005 Mar 17; 6():59. PubMed ID: 15773999
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  • 18. PSI/TM-Coffee: a web server for fast and accurate multiple sequence alignments of regular and transmembrane proteins using homology extension on reduced databases.
    Floden EW, Tommaso PD, Chatzou M, Magis C, Notredame C, Chang JM.
    Nucleic Acids Res; 2016 Jul 08; 44(W1):W339-43. PubMed ID: 27106060
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  • 19. 3D-partner: a web server to infer interacting partners and binding models.
    Chen YC, Lo YS, Hsu WC, Yang JM.
    Nucleic Acids Res; 2007 Jul 08; 35(Web Server issue):W561-7. PubMed ID: 17517763
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  • 20. Secondary structure prediction for aligned RNA sequences.
    Hofacker IL, Fekete M, Stadler PF.
    J Mol Biol; 2002 Jun 21; 319(5):1059-66. PubMed ID: 12079347
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