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Journal Abstract Search

296 related items for PubMed ID: 27338271

  • 1. Investigation of bacterial and archaeal communities: novel protocols using modern sequencing by Illumina MiSeq and traditional DGGE-cloning.
    Kraková L, Šoltys K, Budiš J, Grivalský T, Ďuriš F, Pangallo D, Szemes T.
    Extremophiles; 2016 Sep; 20(5):795-808. PubMed ID: 27338271
    [Abstract] [Full Text] [Related]

  • 2. Two-step denaturing gradient gel electrophoresis (2S-DGGE), a gel-based strategy to capture full-length 16S rRNA gene sequences.
    Wang S, He J.
    Appl Microbiol Biotechnol; 2012 Sep; 95(5):1305-12. PubMed ID: 22772864
    [Abstract] [Full Text] [Related]

  • 3. Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
    Castelino M, Eyre S, Moat J, Fox G, Martin P, Ho P, Upton M, Barton A.
    BMC Microbiol; 2017 Jan 21; 17(1):23. PubMed ID: 28109256
    [Abstract] [Full Text] [Related]

  • 4. Pipeline for amplifying and analyzing amplicons of the V1-V3 region of the 16S rRNA gene.
    Allen HK, Bayles DO, Looft T, Trachsel J, Bass BE, Alt DP, Bearson SM, Nicholson T, Casey TA.
    BMC Res Notes; 2016 Aug 02; 9():380. PubMed ID: 27485508
    [Abstract] [Full Text] [Related]

  • 5. Microbial diversity in an Armenian geothermal spring assessed by molecular and culture-based methods.
    Panosyan H, Birkeland NK.
    J Basic Microbiol; 2014 Nov 02; 54(11):1240-50. PubMed ID: 24740751
    [Abstract] [Full Text] [Related]

  • 6. Distribution of prokaryotic genetic diversity in athalassohaline lakes of the Atacama Desert, Northern Chile.
    Demergasso C, Casamayor EO, Chong G, Galleguillos P, Escudero L, Pedrós-Alió C.
    FEMS Microbiol Ecol; 2004 Apr 01; 48(1):57-69. PubMed ID: 19712431
    [Abstract] [Full Text] [Related]

  • 7. Modified linker-PCR primers facilitate complete sequencing of DGGE DNA fragments.
    O'Sullivan LA, Webster G, Fry JC, Parkes RJ, Weightman AJ.
    J Microbiol Methods; 2008 Dec 01; 75(3):579-81. PubMed ID: 18789360
    [Abstract] [Full Text] [Related]

  • 8. Impact of whole grain highland hull-less barley on the denaturing gradient gel electrophoresis profiles of gut microbial communities in rats fed high-fat diets.
    Xia X, Lu J, Chen X, Zhou L, Huang Y, Ding S, Li G.
    Microbiol Spectr; 2024 Jun 04; 12(6):e0408923. PubMed ID: 38747621
    [Abstract] [Full Text] [Related]

  • 9. Archaeal microbiota population in piglet feces shifts in response to weaning: Methanobrevibacter smithii is replaced with Methanobrevibacter boviskoreani.
    Federici S, Miragoli F, Pisacane V, Rebecchi A, Morelli L, Callegari ML.
    FEMS Microbiol Lett; 2015 May 04; 362(10):. PubMed ID: 25903267
    [Abstract] [Full Text] [Related]

  • 10. Denaturing gradient gel electrophoresis (DGGE).
    Strathdee F, Free A.
    Methods Mol Biol; 2013 May 04; 1054():145-57. PubMed ID: 23913290
    [Abstract] [Full Text] [Related]

  • 11. A nested PCR approach for improved recovery of archaeal 16S rRNA gene fragments from freshwater samples.
    Vissers EW, Bodelier PL, Muyzer G, Laanbroek HJ.
    FEMS Microbiol Lett; 2009 Sep 04; 298(2):193-8. PubMed ID: 19656198
    [Abstract] [Full Text] [Related]

  • 12. Design and application of specific 16S rDNA-targeted primers for assessing endophytic diversity in Dendrobium officinale using nested PCR-DGGE.
    Yu J, Zhou XF, Yang SJ, Liu WH, Hu XF.
    Appl Microbiol Biotechnol; 2013 Nov 04; 97(22):9825-36. PubMed ID: 24127138
    [Abstract] [Full Text] [Related]

  • 13. Comparative assessment of next-generation sequencing, denaturing gradient gel electrophoresis, clonal restriction fragment length polymorphism and cloning-sequencing as methods for characterizing commercial microbial consortia.
    Samarajeewa AD, Hammad A, Masson L, Khan IU, Scroggins R, Beaudette LA.
    J Microbiol Methods; 2015 Jan 04; 108():103-11. PubMed ID: 25479430
    [Abstract] [Full Text] [Related]

  • 14. Making and Sequencing Heavily Multiplexed, High-Throughput 16S Ribosomal RNA Gene Amplicon Libraries Using a Flexible, Two-Stage PCR Protocol.
    Naqib A, Poggi S, Wang W, Hyde M, Kunstman K, Green SJ.
    Methods Mol Biol; 2018 Jan 04; 1783():149-169. PubMed ID: 29767361
    [Abstract] [Full Text] [Related]

  • 15. Effect of organic loading on the microbiota in a temperature-phased anaerobic digestion (TPAD) system co-digesting dairy manure and waste whey.
    Li YF, Abraham C, Nelson MC, Chen PH, Graf J, Yu Z.
    Appl Microbiol Biotechnol; 2015 Oct 04; 99(20):8777-92. PubMed ID: 26084892
    [Abstract] [Full Text] [Related]

  • 16. Combining 16S rRNA gene variable regions enables high-resolution microbial community profiling.
    Fuks G, Elgart M, Amir A, Zeisel A, Turnbaugh PJ, Soen Y, Shental N.
    Microbiome; 2018 Jan 26; 6(1):17. PubMed ID: 29373999
    [Abstract] [Full Text] [Related]

  • 17. PCR/DGGE and 16S rRNA gene library analysis of the colonic microbiota of HLA-B27/beta2-microglobulin transgenic rats.
    McBurney W, Mangold M, Munro K, Schultz M, Rath HC, Tannock GW.
    Lett Appl Microbiol; 2006 Feb 26; 42(2):165-71. PubMed ID: 16441383
    [Abstract] [Full Text] [Related]

  • 18. Bacterial diversity in Philippine fermented mustard (burong mustasa) as revealed by 16S rRNA gene analysis.
    Larcia LL, Estacio RC, Dalmacio LM.
    Benef Microbes; 2011 Dec 01; 2(4):263-71. PubMed ID: 22146686
    [Abstract] [Full Text] [Related]

  • 19. Direct comparison of single-strand conformation polymorphism (SSCP) and denaturing gradient gel electrophoresis (DGGE) to characterize a microbial community on the basis of 16S rRNA gene fragments.
    Hori T, Haruta S, Ueno Y, Ishii M, Igarashi Y.
    J Microbiol Methods; 2006 Jul 01; 66(1):165-9. PubMed ID: 16364477
    [Abstract] [Full Text] [Related]

  • 20. Study of the bacterial diversity of foods: PCR-DGGE versus LH-PCR.
    Garofalo C, Bancalari E, Milanović V, Cardinali F, Osimani A, Sardaro MLS, Bottari B, Bernini V, Aquilanti L, Clementi F, Neviani E, Gatti M.
    Int J Food Microbiol; 2017 Feb 02; 242():24-36. PubMed ID: 27866041
    [Abstract] [Full Text] [Related]

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