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Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

279 related items for PubMed ID: 27428933

  • 1. Joint Alignment of Multiple Protein-Protein Interaction Networks via Convex Optimization.
    Hashemifar S, Huang Q, Xu J.
    J Comput Biol; 2016 Nov; 23(11):903-911. PubMed ID: 27428933
    [Abstract] [Full Text] [Related]

  • 2. Fuse: multiple network alignment via data fusion.
    Gligorijević V, Malod-Dognin N, Pržulj N.
    Bioinformatics; 2016 Apr 15; 32(8):1195-203. PubMed ID: 26668003
    [Abstract] [Full Text] [Related]

  • 3. L-GRAAL: Lagrangian graphlet-based network aligner.
    Malod-Dognin N, Pržulj N.
    Bioinformatics; 2015 Jul 01; 31(13):2182-9. PubMed ID: 25725498
    [Abstract] [Full Text] [Related]

  • 4. A multiobjective memetic algorithm for PPI network alignment.
    Clark C, Kalita J.
    Bioinformatics; 2015 Jun 15; 31(12):1988-98. PubMed ID: 25667548
    [Abstract] [Full Text] [Related]

  • 5. INDEX: Incremental depth extension approach for protein-protein interaction networks alignment.
    Mir A, Naghibzadeh M, Saadati N.
    Biosystems; 2017 Dec 15; 162():24-34. PubMed ID: 28860070
    [Abstract] [Full Text] [Related]

  • 6. Protein2Vec: Aligning Multiple PPI Networks with Representation Learning.
    Gao J, Tian L, Lv T, Wang J, Song B, Hu X.
    IEEE/ACM Trans Comput Biol Bioinform; 2021 Dec 15; 18(1):240-249. PubMed ID: 31478867
    [Abstract] [Full Text] [Related]

  • 7. ModuleAlign: module-based global alignment of protein-protein interaction networks.
    Hashemifar S, Ma J, Naveed H, Canzar S, Xu J.
    Bioinformatics; 2016 Sep 01; 32(17):i658-i664. PubMed ID: 27587686
    [Abstract] [Full Text] [Related]

  • 8. Unified Alignment of Protein-Protein Interaction Networks.
    Malod-Dognin N, Ban K, Pržulj N.
    Sci Rep; 2017 Apr 19; 7(1):953. PubMed ID: 28424527
    [Abstract] [Full Text] [Related]

  • 9. A Novel Computational Approach for Global Alignment for Multiple Biological Networks.
    Djeddi WE, Yahia SB, Nguifo EM.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 Apr 19; 15(6):2060-2066. PubMed ID: 29994444
    [Abstract] [Full Text] [Related]

  • 10. SAlign-a structure aware method for global PPI network alignment.
    Ayub U, Haider I, Naveed H.
    BMC Bioinformatics; 2020 Nov 04; 21(1):500. PubMed ID: 33148180
    [Abstract] [Full Text] [Related]

  • 11. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
    Alkan F, Erten C.
    Bioinformatics; 2015 Jul 15; 31(14):2356-63. PubMed ID: 25788620
    [Abstract] [Full Text] [Related]

  • 12. ConnectedAlign: a PPI network alignment method for identifying conserved protein complexes across multiple species.
    Gao J, Song B, Hu X, Yan F, Wang J.
    BMC Bioinformatics; 2018 Aug 13; 19(Suppl 9):286. PubMed ID: 30367584
    [Abstract] [Full Text] [Related]

  • 13. BalanceAli: Multiple PPI Network Alignment With Balanced High Coverage and Consistency.
    Gao J, Song B, Ke W, Hu X.
    IEEE Trans Nanobioscience; 2017 Jul 13; 16(5):333-340. PubMed ID: 28541215
    [Abstract] [Full Text] [Related]

  • 14. DualAligner: a dual alignment-based strategy to align protein interaction networks.
    Seah BS, Bhowmick SS, Dewey CF.
    Bioinformatics; 2014 Sep 15; 30(18):2619-26. PubMed ID: 24872427
    [Abstract] [Full Text] [Related]

  • 15. LocalAli: an evolutionary-based local alignment approach to identify functionally conserved modules in multiple networks.
    Hu J, Reinert K.
    Bioinformatics; 2015 Feb 01; 31(3):363-72. PubMed ID: 25282642
    [Abstract] [Full Text] [Related]

  • 16. Pairwise alignment of protein interaction networks.
    Koyutürk M, Kim Y, Topkara U, Subramaniam S, Szpankowski W, Grama A.
    J Comput Biol; 2006 Mar 01; 13(2):182-99. PubMed ID: 16597234
    [Abstract] [Full Text] [Related]

  • 17. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
    Maskey S, Cho YR.
    BMC Genomics; 2019 Dec 24; 20(Suppl 9):964. PubMed ID: 31874635
    [Abstract] [Full Text] [Related]

  • 18. PrimAlign: PageRank-inspired Markovian alignment for large biological networks.
    Kalecky K, Cho YR.
    Bioinformatics; 2018 Jul 01; 34(13):i537-i546. PubMed ID: 29949962
    [Abstract] [Full Text] [Related]

  • 19. New GO-based measures in multiple network alignment.
    Yazdani K, Mousapour R, Hayes WB.
    Bioinformatics; 2024 Aug 02; 40(8):. PubMed ID: 39082966
    [Abstract] [Full Text] [Related]

  • 20. Global multiple protein-protein interaction network alignment by combining pairwise network alignments.
    Dohrmann J, Puchin J, Singh R.
    BMC Bioinformatics; 2015 Aug 02; 16 Suppl 13(Suppl 13):S11. PubMed ID: 26423128
    [Abstract] [Full Text] [Related]

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