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Journal Abstract Search

466 related items for PubMed ID: 27454775

  • 21. Mining Temporal Protein Complex Based on the Dynamic PIN Weighted with Connected Affinity and Gene Co-Expression.
    Shen X, Yi L, Jiang X, He T, Hu X, Yang J.
    PLoS One; 2016; 11(4):e0153967. PubMed ID: 27100396
    [Abstract] [Full Text] [Related]

  • 22. Identifying protein complex by integrating characteristic of core-attachment into dynamic PPI network.
    Shen X, Yi L, Jiang X, He T, Yang J, Xie W, Hu P, Hu X.
    PLoS One; 2017; 12(10):e0186134. PubMed ID: 29045465
    [Abstract] [Full Text] [Related]

  • 23. Complex discovery from weighted PPI networks.
    Liu G, Wong L, Chua HN.
    Bioinformatics; 2009 Aug 01; 25(15):1891-7. PubMed ID: 19435747
    [Abstract] [Full Text] [Related]

  • 24. Integrating network topology, gene expression data and GO annotation information for protein complex prediction.
    Zhang W, Xu J, Li Y, Zou X.
    J Bioinform Comput Biol; 2019 Feb 01; 17(1):1950001. PubMed ID: 30803297
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  • 25. Construction and application of dynamic protein interaction network based on time course gene expression data.
    Wang J, Peng X, Li M, Pan Y.
    Proteomics; 2013 Jan 01; 13(2):301-12. PubMed ID: 23225755
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  • 26. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
    Alkan F, Erten C.
    Bioinformatics; 2015 Jul 15; 31(14):2356-63. PubMed ID: 25788620
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  • 27. Methods for protein complex prediction and their contributions towards understanding the organisation, function and dynamics of complexes.
    Srihari S, Yong CH, Patil A, Wong L.
    FEBS Lett; 2015 Sep 14; 589(19 Pt A):2590-602. PubMed ID: 25913176
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  • 28. Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering.
    Theofilatos K, Pavlopoulou N, Papasavvas C, Likothanassis S, Dimitrakopoulos C, Georgopoulos E, Moschopoulos C, Mavroudi S.
    Artif Intell Med; 2015 Mar 14; 63(3):181-9. PubMed ID: 25765008
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  • 29. Predicting essential proteins based on subcellular localization, orthology and PPI networks.
    Li G, Li M, Wang J, Wu J, Wu FX, Pan Y.
    BMC Bioinformatics; 2016 Aug 31; 17 Suppl 8(Suppl 8):279. PubMed ID: 27586883
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  • 30. CACO: A Core-Attachment Method With Cross-Species Functional Ortholog Information to Detect Human Protein Complexes.
    Wang W, Meng X, Xiang J, Shuai Y, Bedru HD, Li M.
    IEEE J Biomed Health Inform; 2023 Sep 31; 27(9):4569-4578. PubMed ID: 37399160
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  • 31. Temporal Protein Complex Identification Based on Dynamic Heterogeneous Protein Information Network Representation Learning.
    Li Z, Zhang Y, Zhou P.
    IEEE/ACM Trans Comput Biol Bioinform; 2024 Sep 31; 21(5):1154-1164. PubMed ID: 38190662
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  • 32. Completing sparse and disconnected protein-protein network by deep learning.
    Huang L, Liao L, Wu CH.
    BMC Bioinformatics; 2018 Mar 22; 19(1):103. PubMed ID: 29566671
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  • 33. Detection of dynamic protein complexes through Markov Clustering based on Elephant Herd Optimization Approach.
    Rani RR, Ramyachitra D, Brindhadevi A.
    Sci Rep; 2019 Jul 31; 9(1):11106. PubMed ID: 31366992
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  • 34. Predicted binding site information improves model ranking in protein docking using experimental and computer-generated target structures.
    Maheshwari S, Brylinski M.
    BMC Struct Biol; 2015 Nov 23; 15():23. PubMed ID: 26597230
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  • 35. Protein functional properties prediction in sparsely-label PPI networks through regularized non-negative matrix factorization.
    Wu Q, Wang Z, Li C, Ye Y, Li Y, Sun N.
    BMC Syst Biol; 2015 Nov 23; 9 Suppl 1(Suppl 1):S9. PubMed ID: 25708164
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  • 36. Reconstructing genome-wide protein-protein interaction networks using multiple strategies with homologous mapping.
    Lo YS, Huang SH, Luo YC, Lin CY, Yang JM.
    PLoS One; 2015 Nov 23; 10(1):e0116347. PubMed ID: 25602759
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  • 37. Prediction of problematic complexes from PPI networks: sparse, embedded, and small complexes.
    Yong CH, Wong L.
    Biol Direct; 2015 Aug 01; 10():40. PubMed ID: 26231465
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  • 38. PCD-GED: Protein complex detection considering PPI dynamics based on time series gene expression data.
    Lakizadeh A, Jalili S, Marashi SA.
    J Theor Biol; 2015 Aug 07; 378():31-8. PubMed ID: 25934349
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  • 39. Identification of Protein Complexes Using Weighted PageRank-Nibble Algorithm and Core-Attachment Structure.
    Peng W, Wang J, Zhao B, Wang L.
    IEEE/ACM Trans Comput Biol Bioinform; 2015 Aug 07; 12(1):179-92. PubMed ID: 26357088
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  • 40. Protein complex detection based on flower pollination mechanism in multi-relation reconstructed dynamic protein networks.
    Lei X, Fang M, Guo L, Wu FX.
    BMC Bioinformatics; 2019 Mar 29; 20(Suppl 3):131. PubMed ID: 30925866
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