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PUBMED FOR HANDHELDS

Journal Abstract Search


253 related items for PubMed ID: 27486222

  • 1. Smoothed Bootstrap Aggregation for Assessing Selection Pressure at Amino Acid Sites.
    Mingrone J, Susko E, Bielawski J.
    Mol Biol Evol; 2016 Nov; 33(11):2976-2989. PubMed ID: 27486222
    [Abstract] [Full Text] [Related]

  • 2. Identifying sites under positive selection with uncertain parameter estimates.
    Aris-Brosou S.
    Genome; 2006 Jul; 49(7):767-76. PubMed ID: 16936785
    [Abstract] [Full Text] [Related]

  • 3. Bayes empirical bayes inference of amino acid sites under positive selection.
    Yang Z, Wong WS, Nielsen R.
    Mol Biol Evol; 2005 Apr; 22(4):1107-18. PubMed ID: 15689528
    [Abstract] [Full Text] [Related]

  • 4. A Bayesian model comparison approach to inferring positive selection.
    Scheffler K, Seoighe C.
    Mol Biol Evol; 2005 Dec; 22(12):2531-40. PubMed ID: 16120799
    [Abstract] [Full Text] [Related]

  • 5. New methods for detecting positive selection at single amino acid sites.
    Suzuki Y.
    J Mol Evol; 2004 Jul; 59(1):11-9. PubMed ID: 15383903
    [Abstract] [Full Text] [Related]

  • 6. Likelihood-based clustering (LiBaC) for codon models, a method for grouping sites according to similarities in the underlying process of evolution.
    Bao L, Gu H, Dunn KA, Bielawski JP.
    Mol Biol Evol; 2008 Sep; 25(9):1995-2007. PubMed ID: 18586695
    [Abstract] [Full Text] [Related]

  • 7. Class of multiple sequence alignment algorithm affects genomic analysis.
    Blackburne BP, Whelan S.
    Mol Biol Evol; 2013 Mar; 30(3):642-53. PubMed ID: 23144040
    [Abstract] [Full Text] [Related]

  • 8. A maximum likelihood method for detecting functional divergence at individual codon sites, with application to gene family evolution.
    Bielawski JP, Yang Z.
    J Mol Evol; 2004 Jul; 59(1):121-32. PubMed ID: 15383915
    [Abstract] [Full Text] [Related]

  • 9. Detecting Adaptation in Protein-Coding Genes Using a Bayesian Site-Heterogeneous Mutation-Selection Codon Substitution Model.
    Rodrigue N, Lartillot N.
    Mol Biol Evol; 2017 Jan; 34(1):204-214. PubMed ID: 27744408
    [Abstract] [Full Text] [Related]

  • 10. Accuracy and power of bayes prediction of amino acid sites under positive selection.
    Anisimova M, Bielawski JP, Yang Z.
    Mol Biol Evol; 2002 Jun; 19(6):950-8. PubMed ID: 12032251
    [Abstract] [Full Text] [Related]

  • 11. A counting renaissance: combining stochastic mapping and empirical Bayes to quickly detect amino acid sites under positive selection.
    Lemey P, Minin VN, Bielejec F, Kosakovsky Pond SL, Suchard MA.
    Bioinformatics; 2012 Dec 15; 28(24):3248-56. PubMed ID: 23064000
    [Abstract] [Full Text] [Related]

  • 12. Bayesian coestimation of phylogeny and sequence alignment.
    Lunter G, Miklós I, Drummond A, Jensen JL, Hein J.
    BMC Bioinformatics; 2005 Apr 01; 6():83. PubMed ID: 15804354
    [Abstract] [Full Text] [Related]

  • 13. Uniformization for sampling realizations of Markov processes: applications to Bayesian implementations of codon substitution models.
    Rodrigue N, Philippe H, Lartillot N.
    Bioinformatics; 2008 Jan 01; 24(1):56-62. PubMed ID: 18003644
    [Abstract] [Full Text] [Related]

  • 14. Extensively Parameterized Mutation-Selection Models Reliably Capture Site-Specific Selective Constraint.
    Spielman SJ, Wilke CO.
    Mol Biol Evol; 2016 Nov 01; 33(11):2990-3002. PubMed ID: 27512115
    [Abstract] [Full Text] [Related]

  • 15. Bayesian restoration of a hidden Markov chain with applications to DNA sequencing.
    Churchill GA, Lazareva B.
    J Comput Biol; 1999 Nov 01; 6(2):261-77. PubMed ID: 10421527
    [Abstract] [Full Text] [Related]

  • 16. Not so different after all: a comparison of methods for detecting amino acid sites under selection.
    Kosakovsky Pond SL, Frost SD.
    Mol Biol Evol; 2005 May 01; 22(5):1208-22. PubMed ID: 15703242
    [Abstract] [Full Text] [Related]

  • 17. Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level.
    Zhang J, Nielsen R, Yang Z.
    Mol Biol Evol; 2005 Dec 01; 22(12):2472-9. PubMed ID: 16107592
    [Abstract] [Full Text] [Related]

  • 18. Bayesian inference of phylogeny and its impact on evolutionary biology.
    Huelsenbeck JP, Ronquist F, Nielsen R, Bollback JP.
    Science; 2001 Dec 14; 294(5550):2310-4. PubMed ID: 11743192
    [Abstract] [Full Text] [Related]

  • 19. Comparison of Bayesian and maximum-likelihood inference of population genetic parameters.
    Beerli P.
    Bioinformatics; 2006 Feb 01; 22(3):341-5. PubMed ID: 16317072
    [Abstract] [Full Text] [Related]

  • 20. The influence of phylogenetic uncertainty on the detection of positive Darwinian selection.
    Pie MR.
    Mol Biol Evol; 2006 Dec 01; 23(12):2274-8. PubMed ID: 16971694
    [Abstract] [Full Text] [Related]


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