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PUBMED FOR HANDHELDS

Journal Abstract Search


678 related items for PubMed ID: 27507169

  • 1. An integrative and applicable phylogenetic footprinting framework for cis-regulatory motifs identification in prokaryotic genomes.
    Liu B, Zhang H, Zhou C, Li G, Fennell A, Wang G, Kang Y, Liu Q, Ma Q.
    BMC Genomics; 2016 Aug 09; 17():578. PubMed ID: 27507169
    [Abstract] [Full Text] [Related]

  • 2. Unsupervised statistical discovery of spaced motifs in prokaryotic genomes.
    Tong H, Schliekelman P, Mrázek J.
    BMC Genomics; 2017 Jan 05; 18(1):27. PubMed ID: 28056763
    [Abstract] [Full Text] [Related]

  • 3. DMINDA: an integrated web server for DNA motif identification and analyses.
    Ma Q, Zhang H, Mao X, Zhou C, Liu B, Chen X, Xu Y.
    Nucleic Acids Res; 2014 Jul 05; 42(Web Server issue):W12-9. PubMed ID: 24753419
    [Abstract] [Full Text] [Related]

  • 4. DMINDA 2.0: integrated and systematic views of regulatory DNA motif identification and analyses.
    Yang J, Chen X, McDermaid A, Ma Q.
    Bioinformatics; 2017 Aug 15; 33(16):2586-2588. PubMed ID: 28419194
    [Abstract] [Full Text] [Related]

  • 5. Promoter addresses: revelations from oligonucleotide profiling applied to the Escherichia coli genome.
    Sivaraman K, Seshasayee AS, Swaminathan K, Muthukumaran G, Pennathur G.
    Theor Biol Med Model; 2005 May 31; 2():20. PubMed ID: 15927055
    [Abstract] [Full Text] [Related]

  • 6. More robust detection of motifs in coexpressed genes by using phylogenetic information.
    Monsieurs P, Thijs G, Fadda AA, De Keersmaecker SC, Vanderleyden J, De Moor B, Marchal K.
    BMC Bioinformatics; 2006 Mar 20; 7():160. PubMed ID: 16549017
    [Abstract] [Full Text] [Related]

  • 7. Accurate recognition of cis-regulatory motifs with the correct lengths in prokaryotic genomes.
    Li G, Liu B, Xu Y.
    Nucleic Acids Res; 2010 Jan 20; 38(2):e12. PubMed ID: 19906734
    [Abstract] [Full Text] [Related]

  • 8. An integrated toolkit for accurate prediction and analysis of cis-regulatory motifs at a genome scale.
    Ma Q, Liu B, Zhou C, Yin Y, Li G, Xu Y.
    Bioinformatics; 2013 Sep 15; 29(18):2261-8. PubMed ID: 23846744
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  • 12. A new framework for identifying cis-regulatory motifs in prokaryotes.
    Li G, Liu B, Ma Q, Xu Y.
    Nucleic Acids Res; 2011 Apr 15; 39(7):e42. PubMed ID: 21149261
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  • 14. Predicting regulons and their cis-regulatory motifs by comparative genomics.
    Manson McGuire A, Church GM.
    Nucleic Acids Res; 2000 Nov 15; 28(22):4523-30. PubMed ID: 11071941
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  • 16. A survey of DNA motif finding algorithms.
    Das MK, Dai HK.
    BMC Bioinformatics; 2007 Nov 01; 8 Suppl 7(Suppl 7):S21. PubMed ID: 18047721
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