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Journal Abstract Search

533 related items for PubMed ID: 27783080

  • 1. A new multi-scale method to reveal hierarchical modular structures in biological networks.
    Jiao QJ, Huang Y, Shen HB.
    Mol Biosyst; 2016 Nov 15; 12(12):3724-3733. PubMed ID: 27783080
    [Abstract] [Full Text] [Related]

  • 2. Detecting Functional Modules Based on a Multiple-Grain Model in Large-Scale Protein-Protein Interaction Networks.
    Ji J, Lv J, Yang C, Zhang A.
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Nov 15; 13(4):610-22. PubMed ID: 26394434
    [Abstract] [Full Text] [Related]

  • 3. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
    Yu L, Gao L, Li K, Zhao Y, Chiu DK.
    Comput Biol Chem; 2011 Oct 12; 35(5):298-307. PubMed ID: 22000801
    [Abstract] [Full Text] [Related]

  • 4. Identification of protein complexes from multi-relationship protein interaction networks.
    Li X, Wang J, Zhao B, Wu FX, Pan Y.
    Hum Genomics; 2016 Jul 25; 10 Suppl 2(Suppl 2):17. PubMed ID: 27461193
    [Abstract] [Full Text] [Related]

  • 5. A fast hierarchical clustering algorithm for functional modules discovery in protein interaction networks.
    Wang J, Li M, Chen J, Pan Y.
    IEEE/ACM Trans Comput Biol Bioinform; 2011 Jul 25; 8(3):607-20. PubMed ID: 20733244
    [Abstract] [Full Text] [Related]

  • 6. Homogeneous decomposition of protein interaction networks: refining the description of intra-modular interactions.
    Del Mondo G, Eveillard D, Rusu I.
    Bioinformatics; 2009 Apr 01; 25(7):926-32. PubMed ID: 19223451
    [Abstract] [Full Text] [Related]

  • 7. Efficient and accurate Greedy Search Methods for mining functional modules in protein interaction networks.
    He J, Li C, Ye B, Zhong W.
    BMC Bioinformatics; 2012 Jun 25; 13 Suppl 10(Suppl 10):S19. PubMed ID: 22759424
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  • 8. Feature related multi-view nonnegative matrix factorization for identifying conserved functional modules in multiple biological networks.
    Wang P, Gao L, Hu Y, Li F.
    BMC Bioinformatics; 2018 Oct 29; 19(1):394. PubMed ID: 30373534
    [Abstract] [Full Text] [Related]

  • 9. Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach.
    Ma HW, Buer J, Zeng AP.
    BMC Bioinformatics; 2004 Dec 16; 5():199. PubMed ID: 15603590
    [Abstract] [Full Text] [Related]

  • 10. Identifying protein complexes and functional modules--from static PPI networks to dynamic PPI networks.
    Chen B, Fan W, Liu J, Wu FX.
    Brief Bioinform; 2014 Mar 16; 15(2):177-94. PubMed ID: 23780996
    [Abstract] [Full Text] [Related]

  • 11. A Type-2 fuzzy data fusion approach for building reliable weighted protein interaction networks with application in protein complex detection.
    Mehranfar A, Ghadiri N, Kouhsar M, Golshani A.
    Comput Biol Med; 2017 Sep 01; 88():18-31. PubMed ID: 28672176
    [Abstract] [Full Text] [Related]

  • 12. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
    Xu B, Guan J.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Sep 01; 11(4):616-27. PubMed ID: 26356332
    [Abstract] [Full Text] [Related]

  • 13. Identify bilayer modules via pseudo-3D clustering: applications to miRNA-gene bilayer networks.
    Xu Y, Guo M, Liu X, Wang C, Liu Y, Liu G.
    Nucleic Acids Res; 2016 Nov 16; 44(20):e152. PubMed ID: 27484480
    [Abstract] [Full Text] [Related]

  • 14. Revealing the hidden relationship by sparse modules in complex networks with a large-scale analysis.
    Jiao QJ, Huang Y, Liu W, Wang XF, Chen XS, Shen HB.
    PLoS One; 2013 Nov 16; 8(6):e66020. PubMed ID: 23762457
    [Abstract] [Full Text] [Related]

  • 15. Identification of functional hubs and modules by converting interactome networks into hierarchical ordering of proteins.
    Cho YR, Zhang A.
    BMC Bioinformatics; 2010 Apr 29; 11 Suppl 3(Suppl 3):S3. PubMed ID: 20438650
    [Abstract] [Full Text] [Related]

  • 16. Identification of functional modules in a PPI network by clique percolation clustering.
    Zhang S, Ning X, Zhang XS.
    Comput Biol Chem; 2006 Dec 29; 30(6):445-51. PubMed ID: 17098476
    [Abstract] [Full Text] [Related]

  • 17. The relative vertex clustering value--a new criterion for the fast discovery of functional modules in protein interaction networks.
    Ibrahim ZM, Ngom A.
    BMC Bioinformatics; 2015 Dec 29; 16 Suppl 4(Suppl 4):S3. PubMed ID: 25734691
    [Abstract] [Full Text] [Related]

  • 18. Mining the modular structure of protein interaction networks.
    Berenstein AJ, Piñero J, Furlong LI, Chernomoretz A.
    PLoS One; 2015 Dec 29; 10(4):e0122477. PubMed ID: 25856434
    [Abstract] [Full Text] [Related]

  • 19. Robustness and adaptation reveal plausible cell cycle controlling subnetwork in Saccharomyces cerevisiae.
    Huang JY, Huang CW, Kao KC, Lai PY.
    Gene; 2013 Apr 10; 518(1):35-41. PubMed ID: 23274654
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  • 20. Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering.
    Theofilatos K, Pavlopoulou N, Papasavvas C, Likothanassis S, Dimitrakopoulos C, Georgopoulos E, Moschopoulos C, Mavroudi S.
    Artif Intell Med; 2015 Mar 10; 63(3):181-9. PubMed ID: 25765008
    [Abstract] [Full Text] [Related]

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