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Journal Abstract Search

571 related items for PubMed ID: 27842515

  • 1.
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  • 2. Different next generation sequencing platforms produce different microbial profiles and diversity in cystic fibrosis sputum.
    Hahn A, Sanyal A, Perez GF, Colberg-Poley AM, Campos J, Rose MC, Pérez-Losada M.
    J Microbiol Methods; 2016 Nov; 130():95-99. PubMed ID: 27609714
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  • 3. Full-length 16S rRNA gene sequencing by PacBio improves taxonomic resolution in human microbiome samples.
    Buetas E, Jordán-López M, López-Roldán A, D'Auria G, Martínez-Priego L, De Marco G, Carda-Diéguez M, Mira A.
    BMC Genomics; 2024 Mar 25; 25(1):310. PubMed ID: 38528457
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  • 4. Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
    Castelino M, Eyre S, Moat J, Fox G, Martin P, Ho P, Upton M, Barton A.
    BMC Microbiol; 2017 Jan 21; 17(1):23. PubMed ID: 28109256
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  • 5. Species-level bacterial community profiling of the healthy sinonasal microbiome using Pacific Biosciences sequencing of full-length 16S rRNA genes.
    Earl JP, Adappa ND, Krol J, Bhat AS, Balashov S, Ehrlich RL, Palmer JN, Workman AD, Blasetti M, Sen B, Hammond J, Cohen NA, Ehrlich GD, Mell JC.
    Microbiome; 2018 Oct 23; 6(1):190. PubMed ID: 30352611
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  • 7. Comparison of the full-length sequence and sub-regions of 16S rRNA gene for skin microbiome profiling.
    Zhang H, Wang X, Chen A, Li S, Tao R, Chen K, Huang P, Li L, Huang J, Li C, Zhang S.
    mSystems; 2024 Jul 23; 9(7):e0039924. PubMed ID: 38934545
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  • 8. Improved OTU-picking using long-read 16S rRNA gene amplicon sequencing and generic hierarchical clustering.
    Franzén O, Hu J, Bao X, Itzkowitz SH, Peter I, Bashir A.
    Microbiome; 2015 Oct 05; 3():43. PubMed ID: 26434730
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  • 11. Evaluation of Full-Length Versus V4-Region 16S rRNA Sequencing for Phylogenetic Analysis of Mouse Intestinal Microbiota After a Dietary Intervention.
    Katiraei S, Anvar Y, Hoving L, Berbée JFP, van Harmelen V, Willems van Dijk K.
    Curr Microbiol; 2022 Jul 30; 79(9):276. PubMed ID: 35907023
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  • 12. Pipeline for amplifying and analyzing amplicons of the V1-V3 region of the 16S rRNA gene.
    Allen HK, Bayles DO, Looft T, Trachsel J, Bass BE, Alt DP, Bearson SM, Nicholson T, Casey TA.
    BMC Res Notes; 2016 Aug 02; 9():380. PubMed ID: 27485508
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  • 13. Improved performance of the PacBio SMRT technology for 16S rDNA sequencing.
    Mosher JJ, Bowman B, Bernberg EL, Shevchenko O, Kan J, Korlach J, Kaplan LA.
    J Microbiol Methods; 2014 Sep 02; 104():59-60. PubMed ID: 24978594
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  • 14. Comparison of iSeq and MiSeq as the two platforms for 16S rRNA sequencing in the study of the gut of rat microbiome.
    Salamon D, Zapała B, Krawczyk A, Potasiewicz A, Nikiforuk A, Stój A, Gosiewski T.
    Appl Microbiol Biotechnol; 2022 Nov 02; 106(22):7671-7681. PubMed ID: 36322250
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  • 15. High-resolution microbiome analysis enabled by linking of 16S rRNA gene sequences with adjacent genomic contexts.
    Kapustina Ž, Medžiūnė J, Alzbutas G, Rokaitis I, Matjošaitis K, Mackevičius G, Žeimytė S, Karpus L, Lubys A.
    Microb Genom; 2021 Sep 02; 7(9):. PubMed ID: 34473015
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  • 18. Efficacy of a 3rd generation high-throughput sequencing platform for analyses of 16S rRNA genes from environmental samples.
    Mosher JJ, Bernberg EL, Shevchenko O, Kan J, Kaplan LA.
    J Microbiol Methods; 2013 Nov 02; 95(2):175-81. PubMed ID: 23999276
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  • 19. Primer, Pipelines, Parameters: Issues in 16S rRNA Gene Sequencing.
    Abellan-Schneyder I, Matchado MS, Reitmeier S, Sommer A, Sewald Z, Baumbach J, List M, Neuhaus K.
    mSphere; 2021 Feb 24; 6(1):. PubMed ID: 33627512
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