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Journal Abstract Search

169 related items for PubMed ID: 27975285

  • 1. Methods to Calculate Spectrum Similarity.
    Yilmaz Ş, Vandermarliere E, Martens L.
    Methods Mol Biol; 2017; 1549():75-100. PubMed ID: 27975285
    [Abstract] [Full Text] [Related]

  • 2. Protein Identification from Tandem Mass Spectra by Database Searching.
    Edwards NJ.
    Methods Mol Biol; 2017; 1558():357-380. PubMed ID: 28150247
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  • 4. Spectrum-to-spectrum searching using a proteome-wide spectral library.
    Yen CY, Houel S, Ahn NG, Old WM.
    Mol Cell Proteomics; 2011 Jul; 10(7):M111.007666. PubMed ID: 21532008
    [Abstract] [Full Text] [Related]

  • 5. General framework for developing and evaluating database scoring algorithms using the TANDEM search engine.
    MacLean B, Eng JK, Beavis RC, McIntosh M.
    Bioinformatics; 2006 Nov 15; 22(22):2830-2. PubMed ID: 16877754
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  • 6. Tandem Mass Spectrum Sequencing: An Alternative to Database Search Engines in Shotgun Proteomics.
    Muth T, Rapp E, Berven FS, Barsnes H, Vaudel M.
    Adv Exp Med Biol; 2016 Nov 15; 919():217-226. PubMed ID: 27975219
    [Abstract] [Full Text] [Related]

  • 7. Spectral library searching for peptide identification via tandem MS.
    Lam H, Aebersold R.
    Methods Mol Biol; 2010 Nov 15; 604():95-103. PubMed ID: 20013366
    [Abstract] [Full Text] [Related]

  • 8. Deep learning embedder method and tool for mass spectra similarity search.
    Qin C, Luo X, Deng C, Shu K, Zhu W, Griss J, Hermjakob H, Bai M, Perez-Riverol Y.
    J Proteomics; 2021 Feb 10; 232():104070. PubMed ID: 33307250
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  • 9. Micro-Data-Independent Acquisition for High-Throughput Proteomics and Sensitive Peptide Mass Spectrum Identification.
    Heaven MR, Cobbs AL, Nei YW, Gutierrez DB, Herren AW, Gunawardena HP, Caprioli RM, Norris JL.
    Anal Chem; 2018 Aug 07; 90(15):8905-8911. PubMed ID: 29984981
    [Abstract] [Full Text] [Related]

  • 10. In-depth analysis of protein inference algorithms using multiple search engines and well-defined metrics.
    Audain E, Uszkoreit J, Sachsenberg T, Pfeuffer J, Liang X, Hermjakob H, Sanchez A, Eisenacher M, Reinert K, Tabb DL, Kohlbacher O, Perez-Riverol Y.
    J Proteomics; 2017 Jan 06; 150():170-182. PubMed ID: 27498275
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  • 13. Spectral library generating function for assessing spectrum-spectrum match significance.
    Wang M, Bandeira N.
    J Proteome Res; 2013 Sep 06; 12(9):3944-51. PubMed ID: 23808827
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  • 15. Data-Dependent Scoring Parameter Optimization in MS-GF+ Using Spectrum Quality Filter.
    Jo H, Paek E.
    J Proteome Res; 2018 Oct 05; 17(10):3593-3598. PubMed ID: 30033731
    [Abstract] [Full Text] [Related]

  • 16. VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.
    Matthiesen R, Trelle MB, Højrup P, Bunkenborg J, Jensen ON.
    J Proteome Res; 2005 Oct 05; 4(6):2338-47. PubMed ID: 16335983
    [Abstract] [Full Text] [Related]

  • 17. Quality assessments of peptide-spectrum matches in shotgun proteomics.
    Granholm V, Käll L.
    Proteomics; 2011 Mar 05; 11(6):1086-93. PubMed ID: 21365749
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