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Journal Abstract Search

231 related items for PubMed ID: 28130237

  • 1. Identification of protein complexes by integrating multiple alignment of protein interaction networks.
    Ma CY, Chen YP, Berger B, Liao CS.
    Bioinformatics; 2017 Jun 01; 33(11):1681-1688. PubMed ID: 28130237
    [Abstract] [Full Text] [Related]

  • 2. Prediction of problematic complexes from PPI networks: sparse, embedded, and small complexes.
    Yong CH, Wong L.
    Biol Direct; 2015 Aug 01; 10():40. PubMed ID: 26231465
    [Abstract] [Full Text] [Related]

  • 3. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
    Xu B, Guan J.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Aug 01; 11(4):616-27. PubMed ID: 26356332
    [Abstract] [Full Text] [Related]

  • 4. PrimAlign: PageRank-inspired Markovian alignment for large biological networks.
    Kalecky K, Cho YR.
    Bioinformatics; 2018 Jul 01; 34(13):i537-i546. PubMed ID: 29949962
    [Abstract] [Full Text] [Related]

  • 5. Supervised maximum-likelihood weighting of composite protein networks for complex prediction.
    Yong CH, Liu G, Chua HN, Wong L.
    BMC Syst Biol; 2012 Jul 01; 6 Suppl 2(Suppl 2):S13. PubMed ID: 23281936
    [Abstract] [Full Text] [Related]

  • 6. Complex Prediction in Large PPI Networks Using Expansion and Stripe of Core Cliques.
    Sahoo TR, Vipsita S, Patra S.
    Interdiscip Sci; 2023 Sep 01; 15(3):331-348. PubMed ID: 36306022
    [Abstract] [Full Text] [Related]

  • 7. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
    Ou-Yang L, Yan H, Zhang XF.
    BMC Bioinformatics; 2017 Dec 01; 18(Suppl 13):463. PubMed ID: 29219066
    [Abstract] [Full Text] [Related]

  • 8. Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data.
    Li M, Wu X, Wang J, Pan Y.
    BMC Bioinformatics; 2012 May 23; 13():109. PubMed ID: 22621308
    [Abstract] [Full Text] [Related]

  • 9. Global alignment of multiple protein interaction networks.
    Singh R, Xu J, Berger B.
    Pac Symp Biocomput; 2008 May 23; ():303-14. PubMed ID: 18229695
    [Abstract] [Full Text] [Related]

  • 10. Protein complex prediction in interaction network based on network motif.
    Patra S, Mohapatra A.
    Comput Biol Chem; 2020 Dec 23; 89():107399. PubMed ID: 33152665
    [Abstract] [Full Text] [Related]

  • 11. Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks.
    Liu X, Yang Z, Sang S, Zhou Z, Wang L, Zhang Y, Lin H, Wang J, Xu B.
    BMC Bioinformatics; 2018 Sep 21; 19(1):332. PubMed ID: 30241459
    [Abstract] [Full Text] [Related]

  • 12. Identifying conserved protein complexes between species by constructing interolog networks.
    Nguyen PV, Srihari S, Leong HW.
    BMC Bioinformatics; 2013 Sep 21; 14 Suppl 16(Suppl 16):S8. PubMed ID: 24564762
    [Abstract] [Full Text] [Related]

  • 13. Optimizing a global alignment of protein interaction networks.
    Chindelevitch L, Ma CY, Liao CS, Berger B.
    Bioinformatics; 2013 Nov 01; 29(21):2765-73. PubMed ID: 24048352
    [Abstract] [Full Text] [Related]

  • 14. Protein complex prediction via dense subgraphs and false positive analysis.
    Hernandez C, Mella C, Navarro G, Olivera-Nappa A, Araya J.
    PLoS One; 2017 Nov 01; 12(9):e0183460. PubMed ID: 28937982
    [Abstract] [Full Text] [Related]

  • 15. ClusterM: a scalable algorithm for computational prediction of conserved protein complexes across multiple protein interaction networks.
    Wang Y, Jeong H, Yoon BJ, Qian X.
    BMC Genomics; 2020 Nov 18; 21(Suppl 10):615. PubMed ID: 33208103
    [Abstract] [Full Text] [Related]

  • 16. DPCMNE: Detecting Protein Complexes From Protein-Protein Interaction Networks Via Multi-Level Network Embedding.
    Meng X, Xiang J, Zheng R, Wu FX, Li M.
    IEEE/ACM Trans Comput Biol Bioinform; 2022 Nov 18; 19(3):1592-1602. PubMed ID: 33417563
    [Abstract] [Full Text] [Related]

  • 17. A methodology for detecting the orthology signal in a PPI network at a functional complex level.
    Jancura P, Mavridou E, Carrillo-de Santa Pau E, Marchiori E.
    BMC Bioinformatics; 2012 Jun 25; 13 Suppl 10(Suppl 10):S18. PubMed ID: 22759423
    [Abstract] [Full Text] [Related]

  • 18. Domain-oriented edge-based alignment of protein interaction networks.
    Guo X, Hartemink AJ.
    Bioinformatics; 2009 Jun 15; 25(12):i240-6. PubMed ID: 19477994
    [Abstract] [Full Text] [Related]

  • 19. Detection of protein complexes from multiple protein interaction networks using graph embedding.
    Liu X, Yang Z, Sang S, Lin H, Wang J, Xu B.
    Artif Intell Med; 2019 May 15; 96():107-115. PubMed ID: 31164203
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  • 20. Efficient and accurate Greedy Search Methods for mining functional modules in protein interaction networks.
    He J, Li C, Ye B, Zhong W.
    BMC Bioinformatics; 2012 Jun 25; 13 Suppl 10(Suppl 10):S19. PubMed ID: 22759424
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