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Journal Abstract Search

369 related items for PubMed ID: 28185552

  • 21. A novel subgradient-based optimization algorithm for blockmodel functional module identification.
    Wang Y, Qian X.
    BMC Bioinformatics; 2013; 14 Suppl 2(Suppl 2):S23. PubMed ID: 23368964
    [Abstract] [Full Text] [Related]

  • 22. Resolving the structure of interactomes with hierarchical agglomerative clustering.
    Park Y, Bader JS.
    BMC Bioinformatics; 2011 Feb 15; 12 Suppl 1(Suppl 1):S44. PubMed ID: 21342576
    [Abstract] [Full Text] [Related]

  • 23. MOEPGA: A novel method to detect protein complexes in yeast protein-protein interaction networks based on MultiObjective Evolutionary Programming Genetic Algorithm.
    Cao B, Luo J, Liang C, Wang S, Song D.
    Comput Biol Chem; 2015 Oct 15; 58():173-81. PubMed ID: 26298638
    [Abstract] [Full Text] [Related]

  • 24. Detection of overlapping protein complexes in gene expression, phenotype and pathways of Saccharomyces cerevisiae using Prorank based Fuzzy algorithm.
    Manikandan P, Ramyachitra D, Banupriya D.
    Gene; 2016 Apr 15; 580(2):144-158. PubMed ID: 26809099
    [Abstract] [Full Text] [Related]

  • 25. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
    Xu B, Guan J.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Apr 15; 11(4):616-27. PubMed ID: 26356332
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  • 26. Protein complex prediction via cost-based clustering.
    King AD, Przulj N, Jurisica I.
    Bioinformatics; 2004 Nov 22; 20(17):3013-20. PubMed ID: 15180928
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  • 27. Protein complexes predictions within protein interaction networks using genetic algorithms.
    Ramadan E, Naef A, Ahmed M.
    BMC Bioinformatics; 2016 Jul 25; 17 Suppl 7(Suppl 7):269. PubMed ID: 27454228
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  • 28. Modeling interactome: scale-free or geometric?
    Przulj N, Corneil DG, Jurisica I.
    Bioinformatics; 2004 Dec 12; 20(18):3508-15. PubMed ID: 15284103
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  • 29. A method for predicting protein complex in dynamic PPI networks.
    Zhang Y, Lin H, Yang Z, Wang J, Liu Y, Sang S.
    BMC Bioinformatics; 2016 Jul 25; 17 Suppl 7(Suppl 7):229. PubMed ID: 27454775
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  • 30. Modifying the DPClus algorithm for identifying protein complexes based on new topological structures.
    Li M, Chen JE, Wang JX, Hu B, Chen G.
    BMC Bioinformatics; 2008 Sep 25; 9():398. PubMed ID: 18816408
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  • 31. In search of the biological significance of modular structures in protein networks.
    Wang Z, Zhang J.
    PLoS Comput Biol; 2007 Jun 25; 3(6):e107. PubMed ID: 17542644
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  • 32. Prediction of Essential Proteins Based on Local Interaction Density.
    Qi Y, Luo J.
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Jun 25; 13(6):1170-1182. PubMed ID: 26701891
    [Abstract] [Full Text] [Related]

  • 33. C-element: a new clustering algorithm to find high quality functional modules in PPI networks.
    Ghasemi M, Rahgozar M, Bidkhori G, Masoudi-Nejad A.
    PLoS One; 2013 Jun 25; 8(9):e72366. PubMed ID: 24039752
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  • 34. Identifying protein complexes based on brainstorming strategy.
    Shen X, Zhou J, Yi L, Hu X, He T, Yang J.
    Methods; 2016 Nov 01; 110():44-53. PubMed ID: 27405005
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  • 35. Identifying protein complex by integrating characteristic of core-attachment into dynamic PPI network.
    Shen X, Yi L, Jiang X, He T, Yang J, Xie W, Hu P, Hu X.
    PLoS One; 2017 Nov 01; 12(10):e0186134. PubMed ID: 29045465
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  • 36. Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks.
    Liu X, Yang Z, Sang S, Zhou Z, Wang L, Zhang Y, Lin H, Wang J, Xu B.
    BMC Bioinformatics; 2018 Sep 21; 19(1):332. PubMed ID: 30241459
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  • 37. CAMWI: Detecting protein complexes using weighted clustering coefficient and weighted density.
    Lakizadeh A, Jalili S, Marashi SA.
    Comput Biol Chem; 2015 Oct 21; 58():231-40. PubMed ID: 26319550
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  • 38. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
    Yu L, Gao L, Li K, Zhao Y, Chiu DK.
    Comput Biol Chem; 2011 Oct 12; 35(5):298-307. PubMed ID: 22000801
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  • 39. Fitting a geometric graph to a protein-protein interaction network.
    Higham DJ, Rasajski M, Przulj N.
    Bioinformatics; 2008 Apr 15; 24(8):1093-9. PubMed ID: 18344248
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  • 40. A structural approach for finding functional modules from large biological networks.
    Mete M, Tang F, Xu X, Yuruk N.
    BMC Bioinformatics; 2008 Aug 12; 9 Suppl 9(Suppl 9):S19. PubMed ID: 18793464
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