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Journal Abstract Search

276 related items for PubMed ID: 28369353

  • 1. An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing.
    Zimin AV, Stevens KA, Crepeau MW, Puiu D, Wegrzyn JL, Yorke JA, Langley CH, Neale DB, Salzberg SL.
    Gigascience; 2017 Jan 01; 6(1):1-4. PubMed ID: 28369353
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  • 4. Sequencing and assembly of the 22-gb loblolly pine genome.
    Zimin A, Stevens KA, Crepeau MW, Holtz-Morris A, Koriabine M, Marçais G, Puiu D, Roberts M, Wegrzyn JL, de Jong PJ, Neale DB, Salzberg SL, Yorke JA, Langley CH.
    Genetics; 2014 Mar 01; 196(3):875-90. PubMed ID: 24653210
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  • 5. Timber! Felling the loblolly pine genome.
    Hamilton JP, Buell CR.
    Genome Biol; 2014 Mar 31; 15(3):111. PubMed ID: 25000971
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  • 6. Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii, a progenitor of bread wheat, with the MaSuRCA mega-reads algorithm.
    Zimin AV, Puiu D, Luo MC, Zhu T, Koren S, Marçais G, Yorke JA, Dvořák J, Salzberg SL.
    Genome Res; 2017 May 31; 27(5):787-792. PubMed ID: 28130360
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  • 10. Whole-exome targeted sequencing of the uncharacterized pine genome.
    Neves LG, Davis JM, Barbazuk WB, Kirst M.
    Plant J; 2013 Jul 31; 75(1):146-156. PubMed ID: 23551702
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  • 11. Complete chloroplast genome sequence and comparative analysis of loblolly pine (Pinus taeda L.) with related species.
    Asaf S, Khan AL, Khan MA, Shahzad R, Lubna, Kang SM, Al-Harrasi A, Al-Rawahi A, Lee IJ.
    PLoS One; 2018 Jul 31; 13(3):e0192966. PubMed ID: 29596414
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  • 12. From Pine Cones to Read Clouds: Rescaffolding the Megagenome of Sugar Pine (Pinus lambertiana).
    Crepeau MW, Langley CH, Stevens KA.
    G3 (Bethesda); 2017 May 05; 7(5):1563-1568. PubMed ID: 28341701
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  • 13. Unique features of the loblolly pine (Pinus taeda L.) megagenome revealed through sequence annotation.
    Wegrzyn JL, Liechty JD, Stevens KA, Wu LS, Loopstra CA, Vasquez-Gross HA, Dougherty WM, Lin BY, Zieve JJ, Martínez-García PJ, Holt C, Yandell M, Zimin AV, Yorke JA, Crepeau MW, Puiu D, Salzberg SL, Dejong PJ, Mockaitis K, Main D, Langley CH, Neale DB.
    Genetics; 2014 Mar 05; 196(3):891-909. PubMed ID: 24653211
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  • 14. LR_Gapcloser: a tiling path-based gap closer that uses long reads to complete genome assembly.
    Xu GC, Xu TJ, Zhu R, Zhang Y, Li SQ, Wang HW, Li JT.
    Gigascience; 2019 Jan 01; 8(1):. PubMed ID: 30576505
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  • 15. QuorUM: An Error Corrector for Illumina Reads.
    Marçais G, Yorke JA, Zimin A.
    PLoS One; 2015 Jan 01; 10(6):e0130821. PubMed ID: 26083032
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  • 16. De novo assembly of the Indian blue peacock (Pavo cristatus) genome using Oxford Nanopore technology and Illumina sequencing.
    Dhar R, Seethy A, Pethusamy K, Singh S, Rohil V, Purkayastha K, Mukherjee I, Goswami S, Singh R, Raj A, Srivastava T, Acharya S, Rajashekhar B, Karmakar S.
    Gigascience; 2019 May 01; 8(5):. PubMed ID: 31077316
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  • 17. AlignGraph2: similar genome-assisted reassembly pipeline for PacBio long reads.
    Huang S, He X, Wang G, Bao E.
    Brief Bioinform; 2021 Sep 02; 22(5):. PubMed ID: 33621981
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  • 19. Adventures in the enormous: a 1.8 million clone BAC library for the 21.7 Gb genome of loblolly pine.
    Magbanua ZV, Ozkan S, Bartlett BD, Chouvarine P, Saski CA, Liston A, Cronn RC, Nelson CD, Peterson DG.
    PLoS One; 2011 Jan 21; 6(1):e16214. PubMed ID: 21283709
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