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Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

163 related items for PubMed ID: 28419194

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  • 2. An integrative and applicable phylogenetic footprinting framework for cis-regulatory motifs identification in prokaryotic genomes.
    Liu B, Zhang H, Zhou C, Li G, Fennell A, Wang G, Kang Y, Liu Q, Ma Q.
    BMC Genomics; 2016 Aug 09; 17():578. PubMed ID: 27507169
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  • 6. Informational and linguistic analysis of large genomic sequence collections via efficient Hadoop cluster algorithms.
    Ferraro Petrillo U, Roscigno G, Cattaneo G, Giancarlo R.
    Bioinformatics; 2018 Jun 01; 34(11):1826-1833. PubMed ID: 29342232
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  • 7. PhylOligo: a package to identify contaminant or untargeted organism sequences in genome assemblies.
    Mallet L, Bitard-Feildel T, Cerutti F, Chiapello H.
    Bioinformatics; 2017 Oct 15; 33(20):3283-3285. PubMed ID: 28637232
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  • 11. STREME: accurate and versatile sequence motif discovery.
    Bailey TL.
    Bioinformatics; 2021 Sep 29; 37(18):2834-2840. PubMed ID: 33760053
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  • 12. EUPAN enables pan-genome studies of a large number of eukaryotic genomes.
    Hu Z, Sun C, Lu KC, Chu X, Zhao Y, Lu J, Shi J, Wei C.
    Bioinformatics; 2017 Aug 01; 33(15):2408-2409. PubMed ID: 28369371
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  • 13. MotifHyades: expectation maximization for de novo DNA motif pair discovery on paired sequences.
    Wong KC.
    Bioinformatics; 2017 Oct 01; 33(19):3028-3035. PubMed ID: 28633280
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  • 14. ORFanFinder: automated identification of taxonomically restricted orphan genes.
    Ekstrom A, Yin Y.
    Bioinformatics; 2016 Jul 01; 32(13):2053-5. PubMed ID: 27153690
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  • 16. DeFCoM: analysis and modeling of transcription factor binding sites using a motif-centric genomic footprinter.
    Quach B, Furey TS.
    Bioinformatics; 2017 Apr 01; 33(7):956-963. PubMed ID: 27993786
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  • 17. PhyD3: a phylogenetic tree viewer with extended phyloXML support for functional genomics data visualization.
    Kreft L, Botzki A, Coppens F, Vandepoele K, Van Bel M.
    Bioinformatics; 2017 Sep 15; 33(18):2946-2947. PubMed ID: 28525531
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  • 18. Chromatin accessibility prediction via a hybrid deep convolutional neural network.
    Liu Q, Xia F, Yin Q, Jiang R.
    Bioinformatics; 2018 Mar 01; 34(5):732-738. PubMed ID: 29069282
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  • 20. BML: a versatile web server for bipartite motif discovery.
    Vahed M, Vahed M, Garmire LX.
    Brief Bioinform; 2022 Jan 17; 23(1):. PubMed ID: 34974623
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