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179 related items for PubMed ID: 28494951

  • 21. Differential stabilization of two hydrophobic cores in the transition state of the villin 14T folding reaction.
    Choe SE, Li L, Matsudaira PT, Wagner G, Shakhnovich EI.
    J Mol Biol; 2000 Nov 17; 304(1):99-115. PubMed ID: 11071813
    [Abstract] [Full Text] [Related]

  • 22. The unfolded state of the C-terminal domain of the ribosomal protein L9 contains both native and non-native structure.
    Shan B, Eliezer D, Raleigh DP.
    Biochemistry; 2009 Jun 09; 48(22):4707-19. PubMed ID: 19301913
    [Abstract] [Full Text] [Related]

  • 23. Conformational analysis of a set of peptides corresponding to the entire primary sequence of the N-terminal domain of the ribosomal protein L9: evidence for stable native-like secondary structure in the unfolded state.
    Luisi DL, Wu WJ, Raleigh DP.
    J Mol Biol; 1999 Mar 26; 287(2):395-407. PubMed ID: 10080901
    [Abstract] [Full Text] [Related]

  • 24. pKa values and the pH dependent stability of the N-terminal domain of L9 as probes of electrostatic interactions in the denatured state. Differentiation between local and nonlocal interactions.
    Kuhlman B, Luisi DL, Young P, Raleigh DP.
    Biochemistry; 1999 Apr 13; 38(15):4896-903. PubMed ID: 10200179
    [Abstract] [Full Text] [Related]

  • 25. Direct analysis of backbone-backbone hydrogen bond formation in protein folding transition states.
    Yang X, Wang M, Fitzgerald MC.
    J Mol Biol; 2006 Oct 20; 363(2):506-19. PubMed ID: 16963082
    [Abstract] [Full Text] [Related]

  • 26. Design of a hyperstable protein by rational consideration of unfolded state interactions.
    Anil B, Craig-Schapiro R, Raleigh DP.
    J Am Chem Soc; 2006 Mar 15; 128(10):3144-5. PubMed ID: 16522085
    [Abstract] [Full Text] [Related]

  • 27. Analysis of electrostatic interactions in the denatured state ensemble of the N-terminal domain of L9 under native conditions.
    Meng W, Raleigh DP.
    Proteins; 2011 Dec 15; 79(12):3500-10. PubMed ID: 21915914
    [Abstract] [Full Text] [Related]

  • 28. Residual electrostatic effects in the unfolded state of the N-terminal domain of L9 can be attributed to nonspecific nonlocal charge-charge interactions.
    Zhou HX.
    Biochemistry; 2002 May 21; 41(20):6533-8. PubMed ID: 12009918
    [Abstract] [Full Text] [Related]

  • 29. Experiments and simulations show how long-range contacts can form in expanded unfolded proteins with negligible secondary structure.
    Meng W, Lyle N, Luan B, Raleigh DP, Pappu RV.
    Proc Natl Acad Sci U S A; 2013 Feb 05; 110(6):2123-8. PubMed ID: 23341588
    [Abstract] [Full Text] [Related]

  • 30. The structure of the transition state for folding of chymotrypsin inhibitor 2 analysed by protein engineering methods: evidence for a nucleation-condensation mechanism for protein folding.
    Itzhaki LS, Otzen DE, Fersht AR.
    J Mol Biol; 1995 Nov 24; 254(2):260-88. PubMed ID: 7490748
    [Abstract] [Full Text] [Related]

  • 31. Nonnative electrostatic interactions can modulate protein folding: molecular dynamics with a grain of salt.
    Azia A, Levy Y.
    J Mol Biol; 2009 Oct 23; 393(2):527-42. PubMed ID: 19683007
    [Abstract] [Full Text] [Related]

  • 32. Global analysis of the effects of temperature and denaturant on the folding and unfolding kinetics of the N-terminal domain of the protein L9.
    Kuhlman B, Luisi DL, Evans PA, Raleigh DP.
    J Mol Biol; 1998 Dec 18; 284(5):1661-70. PubMed ID: 9878377
    [Abstract] [Full Text] [Related]

  • 33. High-Resolution Mapping of the Folding Transition State of a WW Domain.
    Dave K, Jäger M, Nguyen H, Kelly JW, Gruebele M.
    J Mol Biol; 2016 Apr 24; 428(8):1617-36. PubMed ID: 26880334
    [Abstract] [Full Text] [Related]

  • 34. Structure of the transition state in the folding process of human procarboxypeptidase A2 activation domain.
    Villegas V, Martínez JC, Avilés FX, Serrano L.
    J Mol Biol; 1998 Nov 13; 283(5):1027-36. PubMed ID: 9799641
    [Abstract] [Full Text] [Related]

  • 35. Folding of circular permutants with decreased contact order: general trend balanced by protein stability.
    Lindberg MO, Tångrot J, Otzen DE, Dolgikh DA, Finkelstein AV, Oliveberg M.
    J Mol Biol; 2001 Dec 07; 314(4):891-900. PubMed ID: 11734005
    [Abstract] [Full Text] [Related]

  • 36. Structure and stability of the N-terminal domain of the ribosomal protein L9: evidence for rapid two-state folding.
    Kuhlman B, Boice JA, Fairman R, Raleigh DP.
    Biochemistry; 1998 Jan 27; 37(4):1025-32. PubMed ID: 9454593
    [Abstract] [Full Text] [Related]

  • 37. The cold denatured state of the C-terminal domain of protein L9 is compact and contains both native and non-native structure.
    Shan B, McClendon S, Rospigliosi C, Eliezer D, Raleigh DP.
    J Am Chem Soc; 2010 Apr 07; 132(13):4669-77. PubMed ID: 20225821
    [Abstract] [Full Text] [Related]

  • 38. Context-dependent contributions of backbone hydrogen bonding to beta-sheet folding energetics.
    Deechongkit S, Nguyen H, Powers ET, Dawson PE, Gruebele M, Kelly JW.
    Nature; 2004 Jul 01; 430(6995):101-5. PubMed ID: 15229605
    [Abstract] [Full Text] [Related]

  • 39. The low-pH unfolded state of the C-terminal domain of the ribosomal protein L9 contains significant secondary structure in the absence of denaturant but is no more compact than the low-pH urea unfolded state.
    Shan B, Bhattacharya S, Eliezer D, Raleigh DP.
    Biochemistry; 2008 Sep 09; 47(36):9565-73. PubMed ID: 18707127
    [Abstract] [Full Text] [Related]

  • 40. Ionic-strength-dependent effects in protein folding: analysis of rate equilibrium free-energy relationships and their interpretation.
    Song B, Cho JH, Raleigh DP.
    Biochemistry; 2007 Dec 11; 46(49):14206-14. PubMed ID: 18001140
    [Abstract] [Full Text] [Related]

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