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PUBMED FOR HANDHELDS

Journal Abstract Search

162 related items for PubMed ID: 28607455

  • 1. Discovering overlapped protein complexes from weighted PPI networks by removing inter-module hubs.
    Maddi AMA, Eslahchi C.
    Sci Rep; 2017 Jun 12; 7(1):3247. PubMed ID: 28607455
    [Abstract] [Full Text] [Related]

  • 2. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
    Ou-Yang L, Yan H, Zhang XF.
    BMC Bioinformatics; 2017 Dec 01; 18(Suppl 13):463. PubMed ID: 29219066
    [Abstract] [Full Text] [Related]

  • 3. Complex discovery from weighted PPI networks.
    Liu G, Wong L, Chua HN.
    Bioinformatics; 2009 Aug 01; 25(15):1891-7. PubMed ID: 19435747
    [Abstract] [Full Text] [Related]

  • 4. MCL-CAw: a refinement of MCL for detecting yeast complexes from weighted PPI networks by incorporating core-attachment structure.
    Srihari S, Ning K, Leong HW.
    BMC Bioinformatics; 2010 Oct 12; 11():504. PubMed ID: 20939868
    [Abstract] [Full Text] [Related]

  • 5. Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering.
    Theofilatos K, Pavlopoulou N, Papasavvas C, Likothanassis S, Dimitrakopoulos C, Georgopoulos E, Moschopoulos C, Mavroudi S.
    Artif Intell Med; 2015 Mar 12; 63(3):181-9. PubMed ID: 25765008
    [Abstract] [Full Text] [Related]

  • 6. Protein complex prediction by date hub removal.
    Pyrogova I, Wong L.
    Comput Biol Chem; 2018 Jun 12; 74():407-419. PubMed ID: 29602640
    [Abstract] [Full Text] [Related]

  • 7. Protein complex detection via weighted ensemble clustering based on Bayesian nonnegative matrix factorization.
    Ou-Yang L, Dai DQ, Zhang XF.
    PLoS One; 2013 Jun 12; 8(5):e62158. PubMed ID: 23658709
    [Abstract] [Full Text] [Related]

  • 8. Predicting overlapping protein complexes from weighted protein interaction graphs by gradually expanding dense neighborhoods.
    Dimitrakopoulos C, Theofilatos K, Pegkas A, Likothanassis S, Mavroudi S.
    Artif Intell Med; 2016 Jul 12; 71():62-9. PubMed ID: 27506132
    [Abstract] [Full Text] [Related]

  • 9. Identification of protein complexes and functional modules in E. coli PPI networks.
    Kong P, Huang G, Liu W.
    BMC Microbiol; 2020 Aug 06; 20(1):243. PubMed ID: 32762711
    [Abstract] [Full Text] [Related]

  • 10. Identifying protein complexes by reducing noise in interaction networks.
    Liao B, Fu X, Cai L, Chen H.
    Protein Pept Lett; 2014 Jul 06; 21(7):688-95. PubMed ID: 24654850
    [Abstract] [Full Text] [Related]

  • 11. Protein complex prediction via cost-based clustering.
    King AD, Przulj N, Jurisica I.
    Bioinformatics; 2004 Nov 22; 20(17):3013-20. PubMed ID: 15180928
    [Abstract] [Full Text] [Related]

  • 12. Decision tree classifier based on topological characteristics of subgraph for the mining of protein complexes from large scale PPI networks.
    Sahoo TR, Patra S, Vipsita S.
    Comput Biol Chem; 2023 Oct 22; 106():107935. PubMed ID: 37536230
    [Abstract] [Full Text] [Related]

  • 13. Neighbor affinity based algorithm for discovering temporal protein complex from dynamic PPI network.
    Shen X, Yi L, Jiang X, Zhao Y, Hu X, He T, Yang J.
    Methods; 2016 Nov 01; 110():90-96. PubMed ID: 27320204
    [Abstract] [Full Text] [Related]

  • 14. Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data.
    Li M, Wu X, Wang J, Pan Y.
    BMC Bioinformatics; 2012 May 23; 13():109. PubMed ID: 22621308
    [Abstract] [Full Text] [Related]

  • 15. From communities to protein complexes: A local community detection algorithm on PPI networks.
    Dilmaghani S, Brust MR, Ribeiro CHC, Kieffer E, Danoy G, Bouvry P.
    PLoS One; 2022 May 23; 17(1):e0260484. PubMed ID: 35085263
    [Abstract] [Full Text] [Related]

  • 16. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
    Maskey S, Cho YR.
    BMC Genomics; 2019 Dec 24; 20(Suppl 9):964. PubMed ID: 31874635
    [Abstract] [Full Text] [Related]

  • 17. MOEPGA: A novel method to detect protein complexes in yeast protein-protein interaction networks based on MultiObjective Evolutionary Programming Genetic Algorithm.
    Cao B, Luo J, Liang C, Wang S, Song D.
    Comput Biol Chem; 2015 Oct 24; 58():173-81. PubMed ID: 26298638
    [Abstract] [Full Text] [Related]

  • 18. Efficient and accurate Greedy Search Methods for mining functional modules in protein interaction networks.
    He J, Li C, Ye B, Zhong W.
    BMC Bioinformatics; 2012 Jun 25; 13 Suppl 10(Suppl 10):S19. PubMed ID: 22759424
    [Abstract] [Full Text] [Related]

  • 19. CAMWI: Detecting protein complexes using weighted clustering coefficient and weighted density.
    Lakizadeh A, Jalili S, Marashi SA.
    Comput Biol Chem; 2015 Oct 25; 58():231-40. PubMed ID: 26319550
    [Abstract] [Full Text] [Related]

  • 20. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
    Yu L, Gao L, Li K, Zhao Y, Chiu DK.
    Comput Biol Chem; 2011 Oct 12; 35(5):298-307. PubMed ID: 22000801
    [Abstract] [Full Text] [Related]

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