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Journal Abstract Search

162 related items for PubMed ID: 28607455

  • 41. Identifying protein complexes and functional modules--from static PPI networks to dynamic PPI networks.
    Chen B, Fan W, Liu J, Wu FX.
    Brief Bioinform; 2014 Mar; 15(2):177-94. PubMed ID: 23780996
    [Abstract] [Full Text] [Related]

  • 42. Molecular complex detection in protein interaction networks through reinforcement learning.
    Palukuri MV, Patil RS, Marcotte EM.
    BMC Bioinformatics; 2023 Aug 02; 24(1):306. PubMed ID: 37532987
    [Abstract] [Full Text] [Related]

  • 43. Exploring hierarchical and overlapping modular structure in the yeast protein interaction network.
    Liu C, Li J, Zhao Y.
    BMC Genomics; 2010 Dec 02; 11 Suppl 4(Suppl 4):S17. PubMed ID: 21143800
    [Abstract] [Full Text] [Related]

  • 44. Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks.
    Liu X, Yang Z, Sang S, Zhou Z, Wang L, Zhang Y, Lin H, Wang J, Xu B.
    BMC Bioinformatics; 2018 Sep 21; 19(1):332. PubMed ID: 30241459
    [Abstract] [Full Text] [Related]

  • 45. Improving protein-protein interaction prediction using protein language model and protein network features.
    Hu J, Li Z, Rao B, Thafar MA, Arif M.
    Anal Biochem; 2024 Oct 21; 693():115550. PubMed ID: 38679191
    [Abstract] [Full Text] [Related]

  • 46. A methodology for detecting the orthology signal in a PPI network at a functional complex level.
    Jancura P, Mavridou E, Carrillo-de Santa Pau E, Marchiori E.
    BMC Bioinformatics; 2012 Jun 25; 13 Suppl 10(Suppl 10):S18. PubMed ID: 22759423
    [Abstract] [Full Text] [Related]

  • 47. Integrating experimental and literature protein-protein interaction data for protein complex prediction.
    Zhang Y, Lin H, Yang Z, Wang J.
    BMC Genomics; 2015 Jun 25; 16 Suppl 2(Suppl 2):S4. PubMed ID: 25708571
    [Abstract] [Full Text] [Related]

  • 48. Identifying conserved protein complexes between species by constructing interolog networks.
    Nguyen PV, Srihari S, Leong HW.
    BMC Bioinformatics; 2013 Jun 25; 14 Suppl 16(Suppl 16):S8. PubMed ID: 24564762
    [Abstract] [Full Text] [Related]

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  • 50. Identification of hierarchical and overlapping functional modules in PPI networks.
    Wang J, Ren J, Li M, Wu FX.
    IEEE Trans Nanobioscience; 2012 Dec 25; 11(4):386-93. PubMed ID: 22955967
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  • 53. A Network Hierarchy-Based method for functional module detection in protein-protein interaction networks.
    Liu W, Ma L, Jeon B, Chen L, Chen B.
    J Theor Biol; 2018 Oct 14; 455():26-38. PubMed ID: 29981337
    [Abstract] [Full Text] [Related]

  • 54. A novel subgradient-based optimization algorithm for blockmodel functional module identification.
    Wang Y, Qian X.
    BMC Bioinformatics; 2013 Oct 14; 14 Suppl 2(Suppl 2):S23. PubMed ID: 23368964
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  • 57. Evolutionary Graph Clustering for Protein Complex Identification.
    He T, Chan KCC.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 Oct 14; 15(3):892-904. PubMed ID: 28029628
    [Abstract] [Full Text] [Related]

  • 58. Detecting protein complexes with multiple properties by an adaptive harmony search algorithm.
    Wang R, Wang C, Ma H.
    BMC Bioinformatics; 2022 Oct 07; 23(1):414. PubMed ID: 36207692
    [Abstract] [Full Text] [Related]

  • 59. A hub-attachment based method to detect functional modules from confidence-scored protein interactions and expression profiles.
    Chin CH, Chen SH, Ho CW, Ko MT, Lin CY.
    BMC Bioinformatics; 2010 Jan 18; 11 Suppl 1(Suppl 1):S25. PubMed ID: 20122197
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