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Journal Abstract Search

354 related items for PubMed ID: 28859641

  • 1. A streamlined method for analysing genome-wide DNA methylation patterns from low amounts of FFPE DNA.
    Ludgate JL, Wright J, Stockwell PA, Morison IM, Eccles MR, Chatterjee A.
    BMC Med Genomics; 2017 Aug 31; 10(1):54. PubMed ID: 28859641
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  • 4. Improved results of LINE-1 methylation analysis in formalin-fixed, paraffin-embedded tissues with the application of a heating step during the DNA extraction process.
    Wen X, Jeong S, Kim Y, Bae JM, Cho NY, Kim JH, Kang GH.
    Clin Epigenetics; 2017 Aug 31; 9():1. PubMed ID: 28149329
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  • 7. Tools for translational epigenetic studies involving formalin-fixed paraffin-embedded human tissue: applying the Infinium HumanMethyation450 Beadchip assay to large population-based studies.
    Wong EM, Joo JE, McLean CA, Baglietto L, English DR, Severi G, Hopper JL, Milne RL, FitzGerald LM, Giles GG, Southey MC.
    BMC Res Notes; 2015 Oct 06; 8():543. PubMed ID: 26438025
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  • 9. Multiplex bisulfite PCR resequencing of clinical FFPE DNA.
    Korbie D, Lin E, Wall D, Nair SS, Stirzaker C, Clark SJ, Trau M.
    Clin Epigenetics; 2015 Oct 06; 7(1):28. PubMed ID: 25861392
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  • 14. Genome-wide massively parallel sequencing of formaldehyde fixed-paraffin embedded (FFPE) tumor tissues for copy-number- and mutation-analysis.
    Schweiger MR, Kerick M, Timmermann B, Albrecht MW, Borodina T, Parkhomchuk D, Zatloukal K, Lehrach H.
    PLoS One; 2009 Oct 06; 4(5):e5548. PubMed ID: 19440246
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  • 16. An optimised protocol for isolation of RNA from small sections of laser-capture microdissected FFPE tissue amenable for next-generation sequencing.
    Amini P, Ettlin J, Opitz L, Clementi E, Malbon A, Markkanen E.
    BMC Mol Biol; 2017 Aug 23; 18(1):22. PubMed ID: 28835206
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  • 17. Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling.
    Gu H, Smith ZD, Bock C, Boyle P, Gnirke A, Meissner A.
    Nat Protoc; 2011 Apr 23; 6(4):468-81. PubMed ID: 21412275
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  • 19. Automated high throughput nucleic acid purification from formalin-fixed paraffin-embedded tissue samples for next generation sequence analysis.
    Haile S, Pandoh P, McDonald H, Corbett RD, Tsao P, Kirk H, MacLeod T, Jones M, Bilobram S, Brooks D, Smailus D, Steidl C, Scott DW, Bala M, Hirst M, Miller D, Moore RA, Mungall AJ, Coope RJ, Ma Y, Zhao Y, Holt RA, Jones SJ, Marra MA.
    PLoS One; 2017 Apr 23; 12(6):e0178706. PubMed ID: 28570594
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  • 20. Whole exome sequencing (WES) on formalin-fixed, paraffin-embedded (FFPE) tumor tissue in gastrointestinal stromal tumors (GIST).
    Astolfi A, Urbini M, Indio V, Nannini M, Genovese CG, Santini D, Saponara M, Mandrioli A, Ercolani G, Brandi G, Biasco G, Pantaleo MA.
    BMC Genomics; 2015 Nov 03; 16():892. PubMed ID: 26531060
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