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Journal Abstract Search

282 related items for PubMed ID: 28860070

  • 1. INDEX: Incremental depth extension approach for protein-protein interaction networks alignment.
    Mir A, Naghibzadeh M, Saadati N.
    Biosystems; 2017 Dec; 162():24-34. PubMed ID: 28860070
    [Abstract] [Full Text] [Related]

  • 2. Joint Alignment of Multiple Protein-Protein Interaction Networks via Convex Optimization.
    Hashemifar S, Huang Q, Xu J.
    J Comput Biol; 2016 Nov; 23(11):903-911. PubMed ID: 27428933
    [Abstract] [Full Text] [Related]

  • 3. Fuse: multiple network alignment via data fusion.
    Gligorijević V, Malod-Dognin N, Pržulj N.
    Bioinformatics; 2016 Apr 15; 32(8):1195-203. PubMed ID: 26668003
    [Abstract] [Full Text] [Related]

  • 4. NETAL: a new graph-based method for global alignment of protein-protein interaction networks.
    Neyshabur B, Khadem A, Hashemifar S, Arab SS.
    Bioinformatics; 2013 Jul 01; 29(13):1654-62. PubMed ID: 23696650
    [Abstract] [Full Text] [Related]

  • 5. NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks.
    Hu J, Kehr B, Reinert K.
    Bioinformatics; 2014 Feb 15; 30(4):540-8. PubMed ID: 24336806
    [Abstract] [Full Text] [Related]

  • 6. L-GRAAL: Lagrangian graphlet-based network aligner.
    Malod-Dognin N, Pržulj N.
    Bioinformatics; 2015 Jul 01; 31(13):2182-9. PubMed ID: 25725498
    [Abstract] [Full Text] [Related]

  • 7. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
    Alkan F, Erten C.
    Bioinformatics; 2015 Jul 15; 31(14):2356-63. PubMed ID: 25788620
    [Abstract] [Full Text] [Related]

  • 8. A multiobjective memetic algorithm for PPI network alignment.
    Clark C, Kalita J.
    Bioinformatics; 2015 Jun 15; 31(12):1988-98. PubMed ID: 25667548
    [Abstract] [Full Text] [Related]

  • 9. DualAligner: a dual alignment-based strategy to align protein interaction networks.
    Seah BS, Bhowmick SS, Dewey CF.
    Bioinformatics; 2014 Sep 15; 30(18):2619-26. PubMed ID: 24872427
    [Abstract] [Full Text] [Related]

  • 10. A Novel Computational Approach for Global Alignment for Multiple Biological Networks.
    Djeddi WE, Yahia SB, Nguifo EM.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 Sep 15; 15(6):2060-2066. PubMed ID: 29994444
    [Abstract] [Full Text] [Related]

  • 11. Global Alignment of Protein-Protein Interaction Networks: A Survey.
    Elmsallati A, Clark C, Kalita J.
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Sep 15; 13(4):689-705. PubMed ID: 26336140
    [Abstract] [Full Text] [Related]

  • 12. PROPER: global protein interaction network alignment through percolation matching.
    Kazemi E, Hassani H, Grossglauser M, Pezeshgi Modarres H.
    BMC Bioinformatics; 2016 Dec 12; 17(1):527. PubMed ID: 27955623
    [Abstract] [Full Text] [Related]

  • 13. Discovering large conserved functional components in global network alignment by graph matching.
    Zhu Y, Li Y, Liu J, Qin L, Yu JX.
    BMC Genomics; 2018 Sep 24; 19(Suppl 7):670. PubMed ID: 30255780
    [Abstract] [Full Text] [Related]

  • 14. MONACO: accurate biological network alignment through optimal neighborhood matching between focal nodes.
    Woo HM, Yoon BJ.
    Bioinformatics; 2021 Jun 16; 37(10):1401-1410. PubMed ID: 33165517
    [Abstract] [Full Text] [Related]

  • 15. C-GRAAL: common-neighbors-based global GRAph ALignment of biological networks.
    Memišević V, Pržulj N.
    Integr Biol (Camb); 2012 Jul 16; 4(7):734-43. PubMed ID: 22234340
    [Abstract] [Full Text] [Related]

  • 16. PrimAlign: PageRank-inspired Markovian alignment for large biological networks.
    Kalecky K, Cho YR.
    Bioinformatics; 2018 Jul 01; 34(13):i537-i546. PubMed ID: 29949962
    [Abstract] [Full Text] [Related]

  • 17. IsoRankN: spectral methods for global alignment of multiple protein networks.
    Liao CS, Lu K, Baym M, Singh R, Berger B.
    Bioinformatics; 2009 Jun 15; 25(12):i253-8. PubMed ID: 19477996
    [Abstract] [Full Text] [Related]

  • 18. SAlign-a structure aware method for global PPI network alignment.
    Ayub U, Haider I, Naveed H.
    BMC Bioinformatics; 2020 Nov 04; 21(1):500. PubMed ID: 33148180
    [Abstract] [Full Text] [Related]

  • 19. Integrative network alignment reveals large regions of global network similarity in yeast and human.
    Kuchaiev O, Przulj N.
    Bioinformatics; 2011 May 15; 27(10):1390-6. PubMed ID: 21414992
    [Abstract] [Full Text] [Related]

  • 20. Index-Based Network Aligner of Protein-Protein Interaction Networks.
    Elmsallati A, Msalati A, Kalita J.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 May 15; 15(1):330-336. PubMed ID: 28113986
    [Abstract] [Full Text] [Related]

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