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Journal Abstract Search

141 related items for PubMed ID: 28885159

  • 1. Identification of Protein Complexes by Using a Spatial and Temporal Active Protein Interaction Network.
    Li M, Meng X, Zheng R, Wu FX, Li Y, Pan Y, Wang J.
    IEEE/ACM Trans Comput Biol Bioinform; 2020; 17(3):817-827. PubMed ID: 28885159
    [Abstract] [Full Text] [Related]

  • 2. Construction of Refined Protein Interaction Network for Predicting Essential Proteins.
    Li M, Ni P, Chen X, Wang J, Wu FX, Pan Y.
    IEEE/ACM Trans Comput Biol Bioinform; 2019; 16(4):1386-1397. PubMed ID: 28186903
    [Abstract] [Full Text] [Related]

  • 3. Construction and application of dynamic protein interaction network based on time course gene expression data.
    Wang J, Peng X, Li M, Pan Y.
    Proteomics; 2013 Jan; 13(2):301-12. PubMed ID: 23225755
    [Abstract] [Full Text] [Related]

  • 4. Mining Temporal Protein Complex Based on the Dynamic PIN Weighted with Connected Affinity and Gene Co-Expression.
    Shen X, Yi L, Jiang X, He T, Hu X, Yang J.
    PLoS One; 2016 Jan; 11(4):e0153967. PubMed ID: 27100396
    [Abstract] [Full Text] [Related]

  • 5. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
    Xu B, Guan J.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Jan; 11(4):616-27. PubMed ID: 26356332
    [Abstract] [Full Text] [Related]

  • 6. Identifying Protein Complexes from Dynamic Temporal Interval Protein-Protein Interaction Networks.
    Zhang J, Zhong C, Lin HX, Wang M.
    Biomed Res Int; 2019 Jan; 2019():3726721. PubMed ID: 31531351
    [Abstract] [Full Text] [Related]

  • 7. A comparison of the functional modules identified from time course and static PPI network data.
    Tang X, Wang J, Liu B, Li M, Chen G, Pan Y.
    BMC Bioinformatics; 2011 Aug 15; 12():339. PubMed ID: 21849017
    [Abstract] [Full Text] [Related]

  • 8. Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data.
    Li M, Wu X, Wang J, Pan Y.
    BMC Bioinformatics; 2012 May 23; 13():109. PubMed ID: 22621308
    [Abstract] [Full Text] [Related]

  • 9. Identifying dynamic protein complexes based on gene expression profiles and PPI networks.
    Li M, Chen W, Wang J, Wu FX, Pan Y.
    Biomed Res Int; 2014 May 23; 2014():375262. PubMed ID: 24963481
    [Abstract] [Full Text] [Related]

  • 10. Integrating network topology, gene expression data and GO annotation information for protein complex prediction.
    Zhang W, Xu J, Li Y, Zou X.
    J Bioinform Comput Biol; 2019 Feb 23; 17(1):1950001. PubMed ID: 30803297
    [Abstract] [Full Text] [Related]

  • 11. Identifying protein complexes based on brainstorming strategy.
    Shen X, Zhou J, Yi L, Hu X, He T, Yang J.
    Methods; 2016 Nov 01; 110():44-53. PubMed ID: 27405005
    [Abstract] [Full Text] [Related]

  • 12. Accurately Detecting Protein Complexes by Graph Embedding and Combining Functions with Interactions.
    Yao H, Shi Y, Guan J, Zhou S.
    IEEE/ACM Trans Comput Biol Bioinform; 2020 Nov 01; 17(3):777-787. PubMed ID: 30736004
    [Abstract] [Full Text] [Related]

  • 13. Visualization of protein interaction networks: problems and solutions.
    Agapito G, Guzzi PH, Cannataro M.
    BMC Bioinformatics; 2013 Nov 01; 14 Suppl 1(Suppl 1):S1. PubMed ID: 23368786
    [Abstract] [Full Text] [Related]

  • 14. Construction of dynamic probabilistic protein interaction networks for protein complex identification.
    Zhang Y, Lin H, Yang Z, Wang J.
    BMC Bioinformatics; 2016 Apr 27; 17(1):186. PubMed ID: 27117946
    [Abstract] [Full Text] [Related]

  • 15. A Novel Core-Attachment-Based Method to Identify Dynamic Protein Complexes Based on Gene Expression Profiles and PPI Networks.
    Xiao Q, Luo P, Li M, Wang J, Wu FX.
    Proteomics; 2019 Mar 27; 19(5):e1800129. PubMed ID: 30650262
    [Abstract] [Full Text] [Related]

  • 16. The relative vertex clustering value--a new criterion for the fast discovery of functional modules in protein interaction networks.
    Ibrahim ZM, Ngom A.
    BMC Bioinformatics; 2015 Mar 27; 16 Suppl 4(Suppl 4):S3. PubMed ID: 25734691
    [Abstract] [Full Text] [Related]

  • 17. Neighbor affinity based algorithm for discovering temporal protein complex from dynamic PPI network.
    Shen X, Yi L, Jiang X, Zhao Y, Hu X, He T, Yang J.
    Methods; 2016 Nov 01; 110():90-96. PubMed ID: 27320204
    [Abstract] [Full Text] [Related]

  • 18. Identifying essential proteins from protein-protein interaction networks based on influence maximization.
    Xu W, Dong Y, Guan J, Zhou S.
    BMC Bioinformatics; 2022 Aug 16; 23(Suppl 8):339. PubMed ID: 35974329
    [Abstract] [Full Text] [Related]

  • 19. Detecting protein complexes from active protein interaction networks constructed with dynamic gene expression profiles.
    Xiao Q, Wang J, Peng X, Wu FX.
    Proteome Sci; 2013 Nov 07; 11(Suppl 1):S20. PubMed ID: 24565281
    [Abstract] [Full Text] [Related]

  • 20. Detection of dynamic protein complexes through Markov Clustering based on Elephant Herd Optimization Approach.
    Rani RR, Ramyachitra D, Brindhadevi A.
    Sci Rep; 2019 Jul 31; 9(1):11106. PubMed ID: 31366992
    [Abstract] [Full Text] [Related]

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