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Journal Abstract Search

567 related items for PubMed ID: 28937982

  • 1. Protein complex prediction via dense subgraphs and false positive analysis.
    Hernandez C, Mella C, Navarro G, Olivera-Nappa A, Araya J.
    PLoS One; 2017; 12(9):e0183460. PubMed ID: 28937982
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  • 5. RedNemo: topology-based PPI network reconstruction via repeated diffusion with neighborhood modifications.
    Alkan F, Erten C.
    Bioinformatics; 2017 Feb 15; 33(4):537-544. PubMed ID: 27797764
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  • 6. Predicting overlapping protein complexes from weighted protein interaction graphs by gradually expanding dense neighborhoods.
    Dimitrakopoulos C, Theofilatos K, Pegkas A, Likothanassis S, Mavroudi S.
    Artif Intell Med; 2016 Jul 15; 71():62-9. PubMed ID: 27506132
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  • 7. Discovering functional interdependence relationship in PPI networks for protein complex identification.
    Lam WW, Chan KC.
    IEEE Trans Biomed Eng; 2012 Apr 15; 59(4):899-908. PubMed ID: 21095855
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  • 8. Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks.
    Liu X, Yang Z, Sang S, Zhou Z, Wang L, Zhang Y, Lin H, Wang J, Xu B.
    BMC Bioinformatics; 2018 Sep 21; 19(1):332. PubMed ID: 30241459
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  • 9. Detecting Protein Complexes Based on Uncertain Graph Model.
    Zhao B, Wang J, Li M, Wu FX, Pan Y.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Sep 21; 11(3):486-97. PubMed ID: 26356017
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  • 10. Identification of Protein Complexes Using Weighted PageRank-Nibble Algorithm and Core-Attachment Structure.
    Peng W, Wang J, Zhao B, Wang L.
    IEEE/ACM Trans Comput Biol Bioinform; 2015 Sep 21; 12(1):179-92. PubMed ID: 26357088
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  • 11. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
    Xu B, Guan J.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Sep 21; 11(4):616-27. PubMed ID: 26356332
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  • 12. Mining Dense Overlapping Subgraphs in weighted protein-protein interaction networks.
    Lee AJ, Lin MC, Hsu CM.
    Biosystems; 2011 Mar 21; 103(3):392-9. PubMed ID: 21095218
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  • 13. k-Partite cliques of protein interactions: A novel subgraph topology for functional coherence analysis on PPI networks.
    Liu Q, Chen YP, Li J.
    J Theor Biol; 2014 Jan 07; 340():146-54. PubMed ID: 24056214
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  • 14. Markov clustering versus affinity propagation for the partitioning of protein interaction graphs.
    Vlasblom J, Wodak SJ.
    BMC Bioinformatics; 2009 Mar 30; 10():99. PubMed ID: 19331680
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  • 15. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
    Yu L, Gao L, Li K, Zhao Y, Chiu DK.
    Comput Biol Chem; 2011 Oct 12; 35(5):298-307. PubMed ID: 22000801
    [Abstract] [Full Text] [Related]

  • 16. Complex Prediction in Large PPI Networks Using Expansion and Stripe of Core Cliques.
    Sahoo TR, Vipsita S, Patra S.
    Interdiscip Sci; 2023 Sep 12; 15(3):331-348. PubMed ID: 36306022
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  • 17. Evaluation of clustering algorithms for protein-protein interaction networks.
    Brohée S, van Helden J.
    BMC Bioinformatics; 2006 Nov 06; 7():488. PubMed ID: 17087821
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  • 18. A New Method for Detecting Protein Complexes based on the Three Node Cliques.
    Zhang W, Zou X.
    IEEE/ACM Trans Comput Biol Bioinform; 2015 Nov 06; 12(4):879-86. PubMed ID: 26357329
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  • 19. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
    Ou-Yang L, Yan H, Zhang XF.
    BMC Bioinformatics; 2017 Dec 01; 18(Suppl 13):463. PubMed ID: 29219066
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  • 20. Discovering protein complexes in protein interaction networks via exploring the weak ties effect.
    Ma X, Gao L.
    BMC Syst Biol; 2012 Dec 01; 6 Suppl 1(Suppl 1):S6. PubMed ID: 23046740
    [Abstract] [Full Text] [Related]

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