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Journal Abstract Search

142 related items for PubMed ID: 28950876

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  • 5. ROCS: a reproducibility index and confidence score for interaction proteomics studies.
    Dazard JE, Saha S, Ewing RM.
    BMC Bioinformatics; 2012 Jun 08; 13():128. PubMed ID: 22682516
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  • 10. Computational detection of protein complexes in AP-MS experiments.
    Choi H.
    Proteomics; 2012 May 08; 12(10):1663-8. PubMed ID: 22711593
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  • 11. Computational and informatics strategies for identification of specific protein interaction partners in affinity purification mass spectrometry experiments.
    Nesvizhskii AI.
    Proteomics; 2012 May 08; 12(10):1639-55. PubMed ID: 22611043
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  • 12. Parallel Exploration of Interaction Space by BioID and Affinity Purification Coupled to Mass Spectrometry.
    Hesketh GG, Youn JY, Samavarchi-Tehrani P, Raught B, Gingras AC.
    Methods Mol Biol; 2017 May 08; 1550():115-136. PubMed ID: 28188527
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  • 13. The bait compatibility index: computational bait selection for interaction proteomics experiments.
    Saha S, Kaur P, Ewing RM.
    J Proteome Res; 2010 Oct 01; 9(10):4972-81. PubMed ID: 20731387
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  • 14. Mapping Protein-Protein Interactions Using Affinity Purification and Mass Spectrometry.
    Lee CM, Adamchek C, Feke A, Nusinow DA, Gendron JM.
    Methods Mol Biol; 2017 Oct 01; 1610():231-249. PubMed ID: 28439867
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  • 15. Analysis of protein complexes through model-based biclustering of label-free quantitative AP-MS data.
    Choi H, Kim S, Gingras AC, Nesvizhskii AI.
    Mol Syst Biol; 2010 Jun 22; 6():385. PubMed ID: 20571534
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  • 16. SAINTq: Scoring protein-protein interactions in affinity purification - mass spectrometry experiments with fragment or peptide intensity data.
    Teo G, Koh H, Fermin D, Lambert JP, Knight JD, Gingras AC, Choi H.
    Proteomics; 2016 Aug 22; 16(15-16):2238-45. PubMed ID: 27119218
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  • 17. Modeling contaminants in AP-MS/MS experiments.
    Lavallée-Adam M, Cloutier P, Coulombe B, Blanchette M.
    J Proteome Res; 2011 Feb 04; 10(2):886-95. PubMed ID: 21117706
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  • 18. Scoring Large-Scale Affinity Purification Mass Spectrometry Datasets with MiST.
    Verschueren E, Von Dollen J, Cimermancic P, Gulbahce N, Sali A, Krogan NJ.
    Curr Protoc Bioinformatics; 2015 Mar 09; 49():8.19.1-8.19.16. PubMed ID: 25754993
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  • 19. BioPlex Display: An Interactive Suite for Large-Scale AP-MS Protein-Protein Interaction Data.
    Schweppe DK, Huttlin EL, Harper JW, Gygi SP.
    J Proteome Res; 2018 Jan 05; 17(1):722-726. PubMed ID: 29054129
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  • 20. Pre- and post-processing workflow for affinity purification mass spectrometry data.
    Fischer M, Zilkenat S, Gerlach RG, Wagner S, Renard BY.
    J Proteome Res; 2014 May 02; 13(5):2239-49. PubMed ID: 24641689
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