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Journal Abstract Search

104 related items for PubMed ID: 2898280

  • 1. Methods to define and locate patterns of motifs in sequences.
    Staden R.
    Comput Appl Biosci; 1988 Mar; 4(1):53-60. PubMed ID: 2898280
    [Abstract] [Full Text] [Related]

  • 2. Methods for calculating the probabilities of finding patterns in sequences.
    Staden R.
    Comput Appl Biosci; 1989 Apr; 5(2):89-96. PubMed ID: 2720468
    [Abstract] [Full Text] [Related]

  • 3. Software tools for motif and pattern scanning: program descriptions including a universal sequence reading algorithm.
    Cockwell KY, Giles IG.
    Comput Appl Biosci; 1989 Jul; 5(3):227-32. PubMed ID: 2766008
    [Abstract] [Full Text] [Related]

  • 4. A fixed-point alignment technique for detection of recurrent and common sequence motifs associated with biological features.
    Owens J, Chatterjee D, Nussinov R, Konopka AK, Maizel JV.
    Comput Appl Biosci; 1988 Mar; 4(1):73-7. PubMed ID: 3383006
    [Abstract] [Full Text] [Related]

  • 5. Algorithms for the search of amino acid patterns in nucleic acid sequences.
    Peltola H, Söderlund H, Ukkonen E.
    Nucleic Acids Res; 1986 Jan 10; 14(1):99-107. PubMed ID: 3753796
    [Abstract] [Full Text] [Related]

  • 6. Finding flexible patterns in unaligned protein sequences.
    Jonassen I, Collins JF, Higgins DG.
    Protein Sci; 1995 Aug 10; 4(8):1587-95. PubMed ID: 8520485
    [Abstract] [Full Text] [Related]

  • 7. PROMOT: a FORTRAN program to scan protein sequences against a library of known motifs.
    Sternberg MJ.
    Comput Appl Biosci; 1991 Apr 10; 7(2):257-60. PubMed ID: 2059852
    [Abstract] [Full Text] [Related]

  • 8. IBM microcomputer programs that analyze DNA sequences for tRNA genes.
    Shortridge RD, Pirtle IL, Pirtle RM.
    Comput Appl Biosci; 1986 Apr 10; 2(1):13-7. PubMed ID: 3450352
    [Abstract] [Full Text] [Related]

  • 9. A search for common patterns in many sequences.
    Roytberg MA.
    Comput Appl Biosci; 1992 Feb 10; 8(1):57-64. PubMed ID: 1568127
    [Abstract] [Full Text] [Related]

  • 10. FR3D: finding local and composite recurrent structural motifs in RNA 3D structures.
    Sarver M, Zirbel CL, Stombaugh J, Mokdad A, Leontis NB.
    J Math Biol; 2008 Jan 10; 56(1-2):215-52. PubMed ID: 17694311
    [Abstract] [Full Text] [Related]

  • 11. Profile scanning for three-dimensional structural patterns in protein sequences.
    Gribskov M, Homyak M, Edenfield J, Eisenberg D.
    Comput Appl Biosci; 1988 Mar 10; 4(1):61-6. PubMed ID: 3383004
    [Abstract] [Full Text] [Related]

  • 12. MUSA: a parameter free algorithm for the identification of biologically significant motifs.
    Mendes ND, Casimiro AC, Santos PM, Sá-Correia I, Oliveira AL, Freitas AT.
    Bioinformatics; 2006 Dec 15; 22(24):2996-3002. PubMed ID: 17068086
    [Abstract] [Full Text] [Related]

  • 13. Pattern recognition in DNA sequences and its application to consensus foot-printing.
    Lefèvre C, Ikeda JE.
    Comput Appl Biosci; 1993 Jun 15; 9(3):349-54. PubMed ID: 8324636
    [Abstract] [Full Text] [Related]

  • 14. The 3of5 web application for complex and comprehensive pattern matching in protein sequences.
    Seiler M, Mehrle A, Poustka A, Wiemann S.
    BMC Bioinformatics; 2006 Mar 16; 7():144. PubMed ID: 16542452
    [Abstract] [Full Text] [Related]

  • 15. Protein sequence similarity searches using patterns as seeds.
    Zhang Z, Schäffer AA, Miller W, Madden TL, Lipman DJ, Koonin EV, Altschul SF.
    Nucleic Acids Res; 1998 Sep 01; 26(17):3986-90. PubMed ID: 9705509
    [Abstract] [Full Text] [Related]

  • 16. PEAKS: identification of regulatory motifs by their position in DNA sequences.
    Bellora N, Farré D, Mar Albà M.
    Bioinformatics; 2007 Jan 15; 23(2):243-4. PubMed ID: 17098773
    [Abstract] [Full Text] [Related]

  • 17. Pattern matching of biological sequences with limited storage.
    Gotoh O.
    Comput Appl Biosci; 1987 Mar 15; 3(1):17-20. PubMed ID: 3453210
    [Abstract] [Full Text] [Related]

  • 18. Pattern locator: a new tool for finding local sequence patterns in genomic DNA sequences.
    Mrázek J, Xie S.
    Bioinformatics; 2006 Dec 15; 22(24):3099-100. PubMed ID: 17095514
    [Abstract] [Full Text] [Related]

  • 19. Definition and identification of homology domains.
    Lawrence CB, Goldman DA.
    Comput Appl Biosci; 1988 Mar 15; 4(1):25-33. PubMed ID: 3383002
    [Abstract] [Full Text] [Related]

  • 20. Prediction of consensus structural motifs in a family of coregulated RNA sequences.
    Hu YJ.
    Nucleic Acids Res; 2002 Sep 01; 30(17):3886-93. PubMed ID: 12202774
    [Abstract] [Full Text] [Related]

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