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Journal Abstract Search

441 related items for PubMed ID: 29187143

  • 1. DMRfinder: efficiently identifying differentially methylated regions from MethylC-seq data.
    Gaspar JM, Hart RP.
    BMC Bioinformatics; 2017 Nov 29; 18(1):528. PubMed ID: 29187143
    [Abstract] [Full Text] [Related]

  • 2. A comprehensive evaluation of alignment software for reduced representation bisulfite sequencing data.
    Sun X, Han Y, Zhou L, Chen E, Lu B, Liu Y, Pan X, Cowley AW, Liang M, Wu Q, Lu Y, Liu P.
    Bioinformatics; 2018 Aug 15; 34(16):2715-2723. PubMed ID: 29579198
    [Abstract] [Full Text] [Related]

  • 3. Software updates in the Illumina HiSeq platform affect whole-genome bisulfite sequencing.
    Toh H, Shirane K, Miura F, Kubo N, Ichiyanagi K, Hayashi K, Saitou M, Suyama M, Ito T, Sasaki H.
    BMC Genomics; 2017 Jan 05; 18(1):31. PubMed ID: 28056787
    [Abstract] [Full Text] [Related]

  • 4. ampliMethProfiler: a pipeline for the analysis of CpG methylation profiles of targeted deep bisulfite sequenced amplicons.
    Scala G, Affinito O, Palumbo D, Florio E, Monticelli A, Miele G, Chiariotti L, Cocozza S.
    BMC Bioinformatics; 2016 Nov 25; 17(1):484. PubMed ID: 27884103
    [Abstract] [Full Text] [Related]

  • 5. MethylC-analyzer: a comprehensive downstream pipeline for the analysis of genome-wide DNA methylation.
    Lu RJ, Lin PY, Yen MR, Wu BH, Chen PY.
    Bot Stud; 2023 Jan 06; 64(1):1. PubMed ID: 36607439
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  • 9. Estimating absolute methylation levels at single-CpG resolution from methylation enrichment and restriction enzyme sequencing methods.
    Stevens M, Cheng JB, Li D, Xie M, Hong C, Maire CL, Ligon KL, Hirst M, Marra MA, Costello JF, Wang T.
    Genome Res; 2013 Sep 06; 23(9):1541-53. PubMed ID: 23804401
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  • 13. Methodological aspects of whole-genome bisulfite sequencing analysis.
    Adusumalli S, Mohd Omar MF, Soong R, Benoukraf T.
    Brief Bioinform; 2015 May 06; 16(3):369-79. PubMed ID: 24867940
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  • 15. wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data.
    Wöste M, Leitão E, Laurentino S, Horsthemke B, Rahmann S, Schröder C.
    BMC Bioinformatics; 2020 May 01; 21(1):169. PubMed ID: 32357829
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  • 17. DMAP: differential methylation analysis package for RRBS and WGBS data.
    Stockwell PA, Chatterjee A, Rodger EJ, Morison IM.
    Bioinformatics; 2014 Jul 01; 30(13):1814-22. PubMed ID: 24608764
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