These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

235 related items for PubMed ID: 29244006

  • 1. Framework for reanalysis of publicly available Affymetrix® GeneChip® data sets based on functional regions of interest.
    Saka E, Harrison BJ, West K, Petruska JC, Rouchka EC.
    BMC Genomics; 2017 Dec 06; 18(Suppl 10):875. PubMed ID: 29244006
    [Abstract] [Full Text] [Related]

  • 2. GATExplorer: genomic and transcriptomic explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs.
    Risueño A, Fontanillo C, Dinger ME, De Las Rivas J.
    BMC Bioinformatics; 2010 Apr 29; 11():221. PubMed ID: 20429936
    [Abstract] [Full Text] [Related]

  • 3. AffyProbeMiner: a web resource for computing or retrieving accurately redefined Affymetrix probe sets.
    Liu H, Zeeberg BR, Qu G, Koru AG, Ferrucci A, Kahn A, Ryan MC, Nuhanovic A, Munson PJ, Reinhold WC, Kane DW, Weinstein JN.
    Bioinformatics; 2007 Sep 15; 23(18):2385-90. PubMed ID: 17660211
    [Abstract] [Full Text] [Related]

  • 4. Splicy: a web-based tool for the prediction of possible alternative splicing events from Affymetrix probeset data.
    Rambaldi D, Felice B, Praz V, Bucher P, Cittaro D, Guffanti A.
    BMC Bioinformatics; 2007 Mar 08; 8 Suppl 1(Suppl 1):S17. PubMed ID: 17430561
    [Abstract] [Full Text] [Related]

  • 5. Calculation of reliable transcript levels of annotated genes on the basis of multiple probe-sets in Affymetrix microarrays.
    Jaksik R, Polańska J, Herok R, Rzeszowska-Wolny J.
    Acta Biochim Pol; 2009 Mar 08; 56(2):271-7. PubMed ID: 19436837
    [Abstract] [Full Text] [Related]

  • 6. A statistical method for predicting splice variants between two groups of samples using GeneChip expression array data.
    Fan W, Khalid N, Hallahan AR, Olson JM, Zhao LP.
    Theor Biol Med Model; 2006 Apr 07; 3():19. PubMed ID: 16603076
    [Abstract] [Full Text] [Related]

  • 7. Integrating multiple genome annotation databases improves the interpretation of microarray gene expression data.
    Yin J, McLoughlin S, Jeffery IB, Glaviano A, Kennedy B, Higgins DG.
    BMC Genomics; 2010 Jan 20; 11():50. PubMed ID: 20089164
    [Abstract] [Full Text] [Related]

  • 8. Salvaging Affymetrix probes after probe-level re-annotation.
    de Leeuw WC, Rauwerda H, Jonker MJ, Breit TM.
    BMC Res Notes; 2008 Aug 19; 1():66. PubMed ID: 18710586
    [Abstract] [Full Text] [Related]

  • 9. Novel definition files for human GeneChips based on GeneAnnot.
    Ferrari F, Bortoluzzi S, Coppe A, Sirota A, Safran M, Shmoish M, Ferrari S, Lancet D, Danieli GA, Bicciato S.
    BMC Bioinformatics; 2007 Nov 15; 8():446. PubMed ID: 18005434
    [Abstract] [Full Text] [Related]

  • 10. Transcript-based redefinition of grouped oligonucleotide probe sets using AceView: high-resolution annotation for microarrays.
    Lu J, Lee JC, Salit ML, Cam MC.
    BMC Bioinformatics; 2007 Mar 29; 8():108. PubMed ID: 17394657
    [Abstract] [Full Text] [Related]

  • 11. Transcript-level annotation of Affymetrix probesets improves the interpretation of gene expression data.
    Yu H, Wang F, Tu K, Xie L, Li YY, Li YX.
    BMC Bioinformatics; 2007 Jun 11; 8():194. PubMed ID: 17559689
    [Abstract] [Full Text] [Related]

  • 12. Analysis of DNA strand-specific differential expression with high density tiling microarrays.
    Quintales L, Sánchez M, Antequera F.
    BMC Bioinformatics; 2010 Mar 17; 11():136. PubMed ID: 20233458
    [Abstract] [Full Text] [Related]

  • 13. A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat.
    Alberts R, Terpstra P, Hardonk M, Bystrykh LV, de Haan G, Breitling R, Nap JP, Jansen RC.
    BMC Bioinformatics; 2007 Apr 20; 8():132. PubMed ID: 17448222
    [Abstract] [Full Text] [Related]

  • 14. Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data.
    Dai M, Wang P, Boyd AD, Kostov G, Athey B, Jones EG, Bunney WE, Myers RM, Speed TP, Akil H, Watson SJ, Meng F.
    Nucleic Acids Res; 2005 Nov 10; 33(20):e175. PubMed ID: 16284200
    [Abstract] [Full Text] [Related]

  • 15. rePROBE: Workflow for Revised Probe Assignment and Updated Probe-set Annotation in Microarrays.
    Hadlich F, Reyer H, Oster M, Trakooljul N, Muráni E, Ponsuksili S, Wimmers K.
    Genomics Proteomics Bioinformatics; 2021 Dec 10; 19(6):1043-1049. PubMed ID: 33581338
    [Abstract] [Full Text] [Related]

  • 16. Comparisons of annotation predictions for affymetrix GeneChips.
    Stalteri M, Harrison A.
    Appl Bioinformatics; 2006 Dec 10; 5(4):237-48. PubMed ID: 17140270
    [Abstract] [Full Text] [Related]

  • 17. Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements.
    Carter SL, Eklund AC, Mecham BH, Kohane IS, Szallasi Z.
    BMC Bioinformatics; 2005 Apr 25; 6():107. PubMed ID: 15850491
    [Abstract] [Full Text] [Related]

  • 18. Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.
    Ha KCh, Coulombe-Huntington J, Majewski J.
    BMC Genomics; 2009 Nov 12; 10():519. PubMed ID: 19909511
    [Abstract] [Full Text] [Related]

  • 19. Widespread existence of uncorrelated probe intensities from within the same probeset on Affymetrix GeneChips.
    Sanchez-Graillet O, Rowsell J, Langdon WB, Stalteri M, Arteaga-Salas JM, Upton GJ, Harrison AP.
    J Integr Bioinform; 2008 Aug 25; 5(2):. PubMed ID: 20134059
    [Abstract] [Full Text] [Related]

  • 20. NetAffx: Affymetrix probesets and annotations.
    Liu G, Loraine AE, Shigeta R, Cline M, Cheng J, Valmeekam V, Sun S, Kulp D, Siani-Rose MA.
    Nucleic Acids Res; 2003 Jan 01; 31(1):82-6. PubMed ID: 12519953
    [Abstract] [Full Text] [Related]

    Page: [Next] [New Search]
    of 12.