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196 related items for PubMed ID: 29356198

  • 1. Defective XRN3-mediated transcription termination in Arabidopsis affects the expression of protein-coding genes.
    Krzyszton M, Zakrzewska-Placzek M, Kwasnik A, Dojer N, Karlowski W, Kufel J.
    Plant J; 2018 Mar; 93(6):1017-1031. PubMed ID: 29356198
    [Abstract] [Full Text] [Related]

  • 2. Arabidopsis FIERY1, XRN2, and XRN3 are endogenous RNA silencing suppressors.
    Gy I, Gasciolli V, Lauressergues D, Morel JB, Gombert J, Proux F, Proux C, Vaucheret H, Mallory AC.
    Plant Cell; 2007 Nov; 19(11):3451-61. PubMed ID: 17993620
    [Abstract] [Full Text] [Related]

  • 3. RNA Polymerase II Read-Through Promotes Expression of Neighboring Genes in SAL1-PAP-XRN Retrograde Signaling.
    Crisp PA, Smith AB, Ganguly DR, Murray KD, Eichten SR, Millar AA, Pogson BJ.
    Plant Physiol; 2018 Dec; 178(4):1614-1630. PubMed ID: 30301775
    [Abstract] [Full Text] [Related]

  • 4. Two distinct transcription termination modes dictated by promoters.
    Miki TS, Carl SH, Großhans H.
    Genes Dev; 2017 Sep 15; 31(18):1870-1879. PubMed ID: 29021241
    [Abstract] [Full Text] [Related]

  • 5. Activity and roles of Arabidopsis thaliana XRN family exoribonucleases in noncoding RNA pathways.
    Kurihara Y.
    J Plant Res; 2017 Jan 15; 130(1):25-31. PubMed ID: 27988817
    [Abstract] [Full Text] [Related]

  • 6. Salt Stress and CTD PHOSPHATASE-LIKE4 Mediate the Switch between Production of Small Nuclear RNAs and mRNAs.
    Fukudome A, Sun D, Zhang X, Koiwa H.
    Plant Cell; 2017 Dec 15; 29(12):3214-3233. PubMed ID: 29093215
    [Abstract] [Full Text] [Related]

  • 7. Arabidopsis mRNA decay landscape shaped by XRN 5'-3' exoribonucleases.
    Han WY, Hou BH, Lee WC, Chan TC, Lin TH, Chen HM.
    Plant J; 2023 May 15; 114(4):895-913. PubMed ID: 36987558
    [Abstract] [Full Text] [Related]

  • 8. Distinct and concurrent pathways of Pol II- and Pol IV-dependent siRNA biogenesis at a repetitive trans-silencer locus in Arabidopsis thaliana.
    Sasaki T, Lee TF, Liao WW, Naumann U, Liao JL, Eun C, Huang YY, Fu JL, Chen PY, Meyers BC, Matzke AJ, Matzke M.
    Plant J; 2014 Jul 15; 79(1):127-38. PubMed ID: 24798377
    [Abstract] [Full Text] [Related]

  • 9. SUPERKILLER Complex Components Are Required for the RNA Exosome-Mediated Control of Cuticular Wax Biosynthesis in Arabidopsis Inflorescence Stems.
    Zhao L, Kunst L.
    Plant Physiol; 2016 Jun 15; 171(2):960-73. PubMed ID: 27208312
    [Abstract] [Full Text] [Related]

  • 10. Genome-Wide Mapping of Uncapped and Cleaved Transcripts Reveals a Role for the Nuclear mRNA Cap-Binding Complex in Cotranslational RNA Decay in Arabidopsis.
    Yu X, Willmann MR, Anderson SJ, Gregory BD.
    Plant Cell; 2016 Oct 15; 28(10):2385-2397. PubMed ID: 27758893
    [Abstract] [Full Text] [Related]

  • 11. RNA polymerases IV and V influence the 3' boundaries of Polymerase II transcription units in Arabidopsis.
    McKinlay A, Podicheti R, Wendte JM, Cocklin R, Rusch DB.
    RNA Biol; 2018 Feb 01; 15(2):269-279. PubMed ID: 29199514
    [Abstract] [Full Text] [Related]

  • 12. Unraveling the mechanistic features of RNA polymerase II termination by the 5'-3' exoribonuclease Rat1.
    Park J, Kang M, Kim M.
    Nucleic Acids Res; 2015 Mar 11; 43(5):2625-37. PubMed ID: 25722373
    [Abstract] [Full Text] [Related]

  • 13. Effects of Transcription Elongation Rate and Xrn2 Exonuclease Activity on RNA Polymerase II Termination Suggest Widespread Kinetic Competition.
    Fong N, Brannan K, Erickson B, Kim H, Cortazar MA, Sheridan RM, Nguyen T, Karp S, Bentley DL.
    Mol Cell; 2015 Oct 15; 60(2):256-67. PubMed ID: 26474067
    [Abstract] [Full Text] [Related]

  • 14. The plant RNA polymerase II elongation complex: A hub coordinating transcript elongation and mRNA processing.
    Grasser M, Grasser KD.
    Transcription; 2018 Oct 15; 9(2):117-122. PubMed ID: 28886274
    [Abstract] [Full Text] [Related]

  • 15. Cotranscriptional role for Arabidopsis DICER-LIKE 4 in transcription termination.
    Liu F, Bakht S, Dean C.
    Science; 2012 Mar 30; 335(6076):1621-3. PubMed ID: 22461611
    [Abstract] [Full Text] [Related]

  • 16. Human 5' --> 3' exonuclease Xrn2 promotes transcription termination at co-transcriptional cleavage sites.
    West S, Gromak N, Proudfoot NJ.
    Nature; 2004 Nov 25; 432(7016):522-5. PubMed ID: 15565158
    [Abstract] [Full Text] [Related]

  • 17. Transcription beyond borders has downstream consequences.
    Sonmez C, Dean C.
    RNA Biol; 2012 Feb 25; 9(2):143-7. PubMed ID: 22258223
    [Abstract] [Full Text] [Related]

  • 18. Dismantling promoter-driven RNA polymerase II transcription complexes in vitro by the termination factor Rat1.
    Pearson EL, Moore CL.
    J Biol Chem; 2013 Jul 05; 288(27):19750-9. PubMed ID: 23689372
    [Abstract] [Full Text] [Related]

  • 19. Evidence that XRN4, an Arabidopsis homolog of exoribonuclease XRN1, preferentially impacts transcripts with certain sequences or in particular functional categories.
    Rymarquis LA, Souret FF, Green PJ.
    RNA; 2011 Mar 05; 17(3):501-11. PubMed ID: 21224377
    [Abstract] [Full Text] [Related]

  • 20. Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing.
    Mo W, Liu B, Zhang H, Jin X, Lu D, Yu Y, Liu Y, Jia J, Long Y, Deng X, Cao X, Guo H, Zhai J.
    Genome Biol; 2021 Nov 25; 22(1):322. PubMed ID: 34823554
    [Abstract] [Full Text] [Related]

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