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Journal Abstract Search

196 related items for PubMed ID: 29876811

  • 1. Fungal Transcriptomics.
    Singan VR, Kuo RC, Chen C.
    Methods Mol Biol; 2018; 1775():83-92. PubMed ID: 29876811
    [Abstract] [Full Text] [Related]

  • 2. Comprehensive structural annotation of Pichia pastoris transcriptome and the response to various carbon sources using deep paired-end RNA sequencing.
    Liang S, Wang B, Pan L, Ye Y, He M, Han S, Zheng S, Wang X, Lin Y.
    BMC Genomics; 2012 Dec 31; 13():738. PubMed ID: 23276294
    [Abstract] [Full Text] [Related]

  • 3. Enhancing Structural Annotation of Yeast Genomes with RNA-Seq Data.
    Devillers H, Morin N, Neuvéglise C.
    Methods Mol Biol; 2016 Dec 31; 1361():41-56. PubMed ID: 26483014
    [Abstract] [Full Text] [Related]

  • 4. Using RNA-seq for Analysis of Differential Gene Expression in Fungal Species.
    Wang C, Schröder MS, Hammel S, Butler G.
    Methods Mol Biol; 2016 Dec 31; 1361():1-40. PubMed ID: 26483013
    [Abstract] [Full Text] [Related]

  • 5. RNA Sequencing in B-Cell Lymphomas.
    Huang DW, Dawood M, Johnson CA, Schmitz R.
    Methods Mol Biol; 2019 Dec 31; 1956():283-303. PubMed ID: 30779040
    [Abstract] [Full Text] [Related]

  • 6. Current and Future Methods for mRNA Analysis: A Drive Toward Single Molecule Sequencing.
    Bayega A, Fahiminiya S, Oikonomopoulos S, Ragoussis J.
    Methods Mol Biol; 2018 Dec 31; 1783():209-241. PubMed ID: 29767365
    [Abstract] [Full Text] [Related]

  • 7. Comparison of Gene Expression Profiles in Nonmodel Eukaryotic Organisms with RNA-Seq.
    Cheng H, Wang Y, Sun MA.
    Methods Mol Biol; 2018 Dec 31; 1751():3-16. PubMed ID: 29508286
    [Abstract] [Full Text] [Related]

  • 8. Network Analysis of Gene Expression.
    Joehanes R.
    Methods Mol Biol; 2018 Dec 31; 1783():325-341. PubMed ID: 29767370
    [Abstract] [Full Text] [Related]

  • 9. The Molecular Blueprint of a Fungus by Next-Generation Sequencing (NGS).
    Grumaz C, Kirstahler P, Sohn K.
    Methods Mol Biol; 2017 Dec 31; 1508():361-383. PubMed ID: 27837516
    [Abstract] [Full Text] [Related]

  • 10. Recovering complete mitochondrial genome sequences from RNA-Seq: A case study of Polytomella non-photosynthetic green algae.
    Tian Y, Smith DR.
    Mol Phylogenet Evol; 2016 May 31; 98():57-62. PubMed ID: 26860338
    [Abstract] [Full Text] [Related]

  • 11. Construction of Pará rubber tree genome and multi-transcriptome database accelerates rubber researches.
    Makita Y, Kawashima M, Lau NS, Othman AS, Matsui M.
    BMC Genomics; 2018 Jan 19; 19(Suppl 1):922. PubMed ID: 29363422
    [Abstract] [Full Text] [Related]

  • 12. SnowyOwl: accurate prediction of fungal genes by using RNA-Seq and homology information to select among ab initio models.
    Reid I, O'Toole N, Zabaneh O, Nourzadeh R, Dahdouli M, Abdellateef M, Gordon PM, Soh J, Butler G, Sensen CW, Tsang A.
    BMC Bioinformatics; 2014 Jul 01; 15():229. PubMed ID: 24980894
    [Abstract] [Full Text] [Related]

  • 13. Evaluating Programs for Predicting Genes and Transcripts with RNA-Seq Support in Fungal Genomes.
    Reid I.
    Methods Mol Biol; 2018 Jul 01; 1775():209-227. PubMed ID: 29876820
    [Abstract] [Full Text] [Related]

  • 14. A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing.
    Hoang NV, Furtado A, Mason PJ, Marquardt A, Kasirajan L, Thirugnanasambandam PP, Botha FC, Henry RJ.
    BMC Genomics; 2017 May 22; 18(1):395. PubMed ID: 28532419
    [Abstract] [Full Text] [Related]

  • 15. Transcriptome assembly, gene annotation and tissue gene expression atlas of the rainbow trout.
    Salem M, Paneru B, Al-Tobasei R, Abdouni F, Thorgaard GH, Rexroad CE, Yao J.
    PLoS One; 2015 May 22; 10(3):e0121778. PubMed ID: 25793877
    [Abstract] [Full Text] [Related]

  • 16. Global aspects of pacC regulation of pathogenicity genes in Colletotrichum gloeosporioides as revealed by transcriptome analysis.
    Alkan N, Meng X, Friedlander G, Reuveni E, Sukno S, Sherman A, Thon M, Fluhr R, Prusky D.
    Mol Plant Microbe Interact; 2013 Nov 22; 26(11):1345-58. PubMed ID: 23902260
    [Abstract] [Full Text] [Related]

  • 17. Processing and Analysis of RNA-seq Data from Public Resources.
    Zoabi Y, Shomron N.
    Methods Mol Biol; 2021 Nov 22; 2243():81-94. PubMed ID: 33606253
    [Abstract] [Full Text] [Related]

  • 18. PARRoT- a homology-based strategy to quantify and compare RNA-sequencing from non-model organisms.
    Gan RC, Chen TW, Wu TH, Huang PJ, Lee CC, Yeh YM, Chiu CH, Huang HD, Tang P.
    BMC Bioinformatics; 2016 Dec 22; 17(Suppl 19):513. PubMed ID: 28155708
    [Abstract] [Full Text] [Related]

  • 19. Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly of Malassezia sympodialis.
    Zhu Y, Engström PG, Tellgren-Roth C, Baudo CD, Kennell JC, Sun S, Billmyre RB, Schröder MS, Andersson A, Holm T, Sigurgeirsson B, Wu G, Sankaranarayanan SR, Siddharthan R, Sanyal K, Lundeberg J, Nystedt B, Boekhout T, Dawson TL, Heitman J, Scheynius A, Lehtiö J.
    Nucleic Acids Res; 2017 Mar 17; 45(5):2629-2643. PubMed ID: 28100699
    [Abstract] [Full Text] [Related]

  • 20. Comprehensive Annotation of the Parastagonospora nodorum Reference Genome Using Next-Generation Genomics, Transcriptomics and Proteogenomics.
    Syme RA, Tan KC, Hane JK, Dodhia K, Stoll T, Hastie M, Furuki E, Ellwood SR, Williams AH, Tan YF, Testa AC, Gorman JJ, Oliver RP.
    PLoS One; 2016 Mar 17; 11(2):e0147221. PubMed ID: 26840125
    [Abstract] [Full Text] [Related]

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