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Journal Abstract Search

258 related items for PubMed ID: 29994444

  • 1. A Novel Computational Approach for Global Alignment for Multiple Biological Networks.
    Djeddi WE, Yahia SB, Nguifo EM.
    IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(6):2060-2066. PubMed ID: 29994444
    [Abstract] [Full Text] [Related]

  • 2. NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks.
    Hu J, Kehr B, Reinert K.
    Bioinformatics; 2014 Feb 15; 30(4):540-8. PubMed ID: 24336806
    [Abstract] [Full Text] [Related]

  • 3. Global Biological Network Alignment by Using Efficient Memetic Algorithm.
    Maoguo Gong, Zhenglin Peng, Lijia Ma, Jiaxiang Huang.
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Nov 15; 13(6):1117-1129. PubMed ID: 28055895
    [Abstract] [Full Text] [Related]

  • 4. BalanceAli: Multiple PPI Network Alignment With Balanced High Coverage and Consistency.
    Gao J, Song B, Ke W, Hu X.
    IEEE Trans Nanobioscience; 2017 Jul 15; 16(5):333-340. PubMed ID: 28541215
    [Abstract] [Full Text] [Related]

  • 5. Joint Alignment of Multiple Protein-Protein Interaction Networks via Convex Optimization.
    Hashemifar S, Huang Q, Xu J.
    J Comput Biol; 2016 Nov 15; 23(11):903-911. PubMed ID: 27428933
    [Abstract] [Full Text] [Related]

  • 6. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
    Alkan F, Erten C.
    Bioinformatics; 2015 Jul 15; 31(14):2356-63. PubMed ID: 25788620
    [Abstract] [Full Text] [Related]

  • 7. Global alignment of protein-protein interaction networks.
    Mongiovì M, Sharan R.
    Methods Mol Biol; 2013 Jul 15; 939():21-34. PubMed ID: 23192538
    [Abstract] [Full Text] [Related]

  • 8. Protein2Vec: Aligning Multiple PPI Networks with Representation Learning.
    Gao J, Tian L, Lv T, Wang J, Song B, Hu X.
    IEEE/ACM Trans Comput Biol Bioinform; 2021 Jul 15; 18(1):240-249. PubMed ID: 31478867
    [Abstract] [Full Text] [Related]

  • 9. INDEX: Incremental depth extension approach for protein-protein interaction networks alignment.
    Mir A, Naghibzadeh M, Saadati N.
    Biosystems; 2017 Dec 15; 162():24-34. PubMed ID: 28860070
    [Abstract] [Full Text] [Related]

  • 10. PROPER: global protein interaction network alignment through percolation matching.
    Kazemi E, Hassani H, Grossglauser M, Pezeshgi Modarres H.
    BMC Bioinformatics; 2016 Dec 12; 17(1):527. PubMed ID: 27955623
    [Abstract] [Full Text] [Related]

  • 11. SAMNA: accurate alignment of multiple biological networks based on simulated annealing.
    Chen J, Wang Z, Huang J.
    J Integr Bioinform; 2023 Dec 01; 20(4):. PubMed ID: 38097366
    [Abstract] [Full Text] [Related]

  • 12. DualAligner: a dual alignment-based strategy to align protein interaction networks.
    Seah BS, Bhowmick SS, Dewey CF.
    Bioinformatics; 2014 Sep 15; 30(18):2619-26. PubMed ID: 24872427
    [Abstract] [Full Text] [Related]

  • 13. C-GRAAL: common-neighbors-based global GRAph ALignment of biological networks.
    Memišević V, Pržulj N.
    Integr Biol (Camb); 2012 Jul 15; 4(7):734-43. PubMed ID: 22234340
    [Abstract] [Full Text] [Related]

  • 14. GraphCrunch 2: Software tool for network modeling, alignment and clustering.
    Kuchaiev O, Stevanović A, Hayes W, Pržulj N.
    BMC Bioinformatics; 2011 Jan 19; 12():24. PubMed ID: 21244715
    [Abstract] [Full Text] [Related]

  • 15. MPGM: Scalable and Accurate Multiple Network Alignment.
    Kazemi E, Grossglauser M.
    IEEE/ACM Trans Comput Biol Bioinform; 2020 Jan 19; 17(6):2040-2052. PubMed ID: 31056510
    [Abstract] [Full Text] [Related]

  • 16. PrimAlign: PageRank-inspired Markovian alignment for large biological networks.
    Kalecky K, Cho YR.
    Bioinformatics; 2018 Jul 01; 34(13):i537-i546. PubMed ID: 29949962
    [Abstract] [Full Text] [Related]

  • 17. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
    Maskey S, Cho YR.
    BMC Genomics; 2019 Dec 24; 20(Suppl 9):964. PubMed ID: 31874635
    [Abstract] [Full Text] [Related]

  • 18. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
    Ou-Yang L, Yan H, Zhang XF.
    BMC Bioinformatics; 2017 Dec 01; 18(Suppl 13):463. PubMed ID: 29219066
    [Abstract] [Full Text] [Related]

  • 19. Fuse: multiple network alignment via data fusion.
    Gligorijević V, Malod-Dognin N, Pržulj N.
    Bioinformatics; 2016 Apr 15; 32(8):1195-203. PubMed ID: 26668003
    [Abstract] [Full Text] [Related]

  • 20. Scalable global alignment for multiple biological networks.
    Shih YK, Parthasarathy S.
    BMC Bioinformatics; 2012 Mar 21; 13 Suppl 3(Suppl 3):S11. PubMed ID: 22536895
    [Abstract] [Full Text] [Related]

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