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Journal Abstract Search

149 related items for PubMed ID: 30030807

  • 1. Computing and Visualizing Gene Function Similarity and Coherence with NaviGO.
    Ding Z, Wei Q, Kihara D.
    Methods Mol Biol; 2018; 1807():113-130. PubMed ID: 30030807
    [Abstract] [Full Text] [Related]

  • 2. NaviGO: interactive tool for visualization and functional similarity and coherence analysis with gene ontology.
    Wei Q, Khan IK, Ding Z, Yerneni S, Kihara D.
    BMC Bioinformatics; 2017 Mar 20; 18(1):177. PubMed ID: 28320317
    [Abstract] [Full Text] [Related]

  • 3. Using PFP and ESG Protein Function Prediction Web Servers.
    Wei Q, McGraw J, Khan I, Kihara D.
    Methods Mol Biol; 2017 Mar 20; 1611():1-14. PubMed ID: 28451967
    [Abstract] [Full Text] [Related]

  • 4. Measuring semantic similarities by combining gene ontology annotations and gene co-function networks.
    Peng J, Uygun S, Kim T, Wang Y, Rhee SY, Chen J.
    BMC Bioinformatics; 2015 Feb 14; 16():44. PubMed ID: 25886899
    [Abstract] [Full Text] [Related]

  • 5. Visualizing GO Annotations.
    Supek F, Škunca N.
    Methods Mol Biol; 2017 Feb 14; 1446():207-220. PubMed ID: 27812945
    [Abstract] [Full Text] [Related]

  • 6. DaGO-Fun: tool for Gene Ontology-based functional analysis using term information content measures.
    Mazandu GK, Mulder NJ.
    BMC Bioinformatics; 2013 Sep 25; 14():284. PubMed ID: 24067102
    [Abstract] [Full Text] [Related]

  • 7. InteGO2: a web tool for measuring and visualizing gene semantic similarities using Gene Ontology.
    Peng J, Li H, Liu Y, Juan L, Jiang Q, Wang Y, Chen J.
    BMC Genomics; 2016 Aug 31; 17 Suppl 5(Suppl 5):530. PubMed ID: 27586009
    [Abstract] [Full Text] [Related]

  • 8. GOSemSim: an R package for measuring semantic similarity among GO terms and gene products.
    Yu G, Li F, Qin Y, Bo X, Wu Y, Wang S.
    Bioinformatics; 2010 Apr 01; 26(7):976-8. PubMed ID: 20179076
    [Abstract] [Full Text] [Related]

  • 9. An improved method for functional similarity analysis of genes based on Gene Ontology.
    Tian Z, Wang C, Guo M, Liu X, Teng Z.
    BMC Syst Biol; 2016 Dec 23; 10(Suppl 4):119. PubMed ID: 28155727
    [Abstract] [Full Text] [Related]

  • 10. PFP/ESG: automated protein function prediction servers enhanced with Gene Ontology visualization tool.
    Khan IK, Wei Q, Chitale M, Kihara D.
    Bioinformatics; 2015 Jan 15; 31(2):271-2. PubMed ID: 25273111
    [Abstract] [Full Text] [Related]

  • 11. GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions.
    Wang G, Oh DH, Dassanayake M.
    BMC Bioinformatics; 2020 Apr 10; 21(1):139. PubMed ID: 32272889
    [Abstract] [Full Text] [Related]

  • 12. TopoICSim: a new semantic similarity measure based on gene ontology.
    Ehsani R, Drabløs F.
    BMC Bioinformatics; 2016 Jul 29; 17(1):296. PubMed ID: 27473391
    [Abstract] [Full Text] [Related]

  • 13. NET-GE: a novel NETwork-based Gene Enrichment for detecting biological processes associated to Mendelian diseases.
    Di Lena P, Martelli PL, Fariselli P, Casadio R.
    BMC Genomics; 2015 Jul 29; 16 Suppl 8(Suppl 8):S6. PubMed ID: 26110971
    [Abstract] [Full Text] [Related]

  • 14. NetGen: a novel network-based probabilistic generative model for gene set functional enrichment analysis.
    Sun D, Liu Y, Zhang XS, Wu LY.
    BMC Syst Biol; 2017 Sep 21; 11(Suppl 4):75. PubMed ID: 28950861
    [Abstract] [Full Text] [Related]

  • 15. GOGO: An improved algorithm to measure the semantic similarity between gene ontology terms.
    Zhao C, Wang Z.
    Sci Rep; 2018 Oct 10; 8(1):15107. PubMed ID: 30305653
    [Abstract] [Full Text] [Related]

  • 16. Gogadget: An R Package for Interpretation and Visualization of GO Enrichment Results.
    Nota B.
    Mol Inform; 2017 May 10; 36(5-6):. PubMed ID: 28000438
    [Abstract] [Full Text] [Related]

  • 17. GOTrapper: a tool to navigate through branches of gene ontology hierarchy.
    Hassan H, Shanak S.
    BMC Bioinformatics; 2019 Jan 11; 20(1):20. PubMed ID: 30634902
    [Abstract] [Full Text] [Related]

  • 18. Improving the measurement of semantic similarity by combining gene ontology and co-functional network: a random walk based approach.
    Peng J, Zhang X, Hui W, Lu J, Li Q, Liu S, Shang X.
    BMC Syst Biol; 2018 Mar 19; 12(Suppl 2):18. PubMed ID: 29560823
    [Abstract] [Full Text] [Related]

  • 19. GO2MSIG, an automated GO based multi-species gene set generator for gene set enrichment analysis.
    Powell JA.
    BMC Bioinformatics; 2014 May 17; 15():146. PubMed ID: 24884810
    [Abstract] [Full Text] [Related]

  • 20. Primer on the Gene Ontology.
    Gaudet P, Škunca N, Hu JC, Dessimoz C.
    Methods Mol Biol; 2017 May 17; 1446():25-37. PubMed ID: 27812933
    [Abstract] [Full Text] [Related]

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