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Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

245 related items for PubMed ID: 30170044

  • 21. EDGA: A Population Evolution Direction-Guided Genetic Algorithm for Protein-Ligand Docking.
    Guan B, Zhang C, Ning J.
    J Comput Biol; 2016 Jul; 23(7):585-96. PubMed ID: 26895461
    [Abstract] [Full Text] [Related]

  • 22. Parallel multi-swarm cooperative particle swarm optimization for protein-ligand docking and virtual screening.
    Li C, Li J, Sun J, Mao L, Palade V, Ahmad B.
    BMC Bioinformatics; 2022 May 30; 23(1):201. PubMed ID: 35637537
    [Abstract] [Full Text] [Related]

  • 23. Development and validation of a modular, extensible docking program: DOCK 5.
    Moustakas DT, Lang PT, Pegg S, Pettersen E, Kuntz ID, Brooijmans N, Rizzo RC.
    J Comput Aided Mol Des; 2006 May 30; 20(10-11):601-19. PubMed ID: 17149653
    [Abstract] [Full Text] [Related]

  • 24. FDS: flexible ligand and receptor docking with a continuum solvent model and soft-core energy function.
    Taylor RD, Jewsbury PJ, Essex JW.
    J Comput Chem; 2003 Oct 30; 24(13):1637-56. PubMed ID: 12926007
    [Abstract] [Full Text] [Related]

  • 25. istar: a web platform for large-scale protein-ligand docking.
    Li H, Leung KS, Ballester PJ, Wong MH.
    PLoS One; 2014 Oct 30; 9(1):e85678. PubMed ID: 24475049
    [Abstract] [Full Text] [Related]

  • 26. Comparative study of several algorithms for flexible ligand docking.
    Bursulaya BD, Totrov M, Abagyan R, Brooks CL.
    J Comput Aided Mol Des; 2003 Nov 30; 17(11):755-63. PubMed ID: 15072435
    [Abstract] [Full Text] [Related]

  • 27. A fast protein-ligand docking algorithm based on hydrogen bond matching and surface shape complementarity.
    Luo W, Pei J, Zhu Y.
    J Mol Model; 2010 May 30; 16(5):903-13. PubMed ID: 19823881
    [Abstract] [Full Text] [Related]

  • 28. Comparative Evaluation of Covalent Docking Tools.
    Scarpino A, Ferenczy GG, Keserű GM.
    J Chem Inf Model; 2018 Jul 23; 58(7):1441-1458. PubMed ID: 29890081
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  • 29. Flexible CDOCKER: Hybrid Searching Algorithm and Scoring Function with Side Chain Conformational Entropy.
    Wu Y, Brooks CL.
    J Chem Inf Model; 2021 Nov 22; 61(11):5535-5549. PubMed ID: 34704754
    [Abstract] [Full Text] [Related]

  • 30. PLHINT: A knowledge-driven computational approach based on the intermolecular H bond interactions at the protein-ligand interface from docking solutions.
    Kumar SP.
    J Mol Graph Model; 2018 Jan 22; 79():194-212. PubMed ID: 29241118
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  • 31. A python-based docking program utilizing a receptor bound ligand shape: PythDock.
    Chung JY, Cho SJ, Hah JM.
    Arch Pharm Res; 2011 Sep 22; 34(9):1451-8. PubMed ID: 21975806
    [Abstract] [Full Text] [Related]

  • 32. MOLS 2.0: software package for peptide modeling and protein-ligand docking.
    Paul DS, Gautham N.
    J Mol Model; 2016 Oct 22; 22(10):239. PubMed ID: 27638416
    [Abstract] [Full Text] [Related]

  • 33. GalaxyDock: protein-ligand docking with flexible protein side-chains.
    Shin WH, Seok C.
    J Chem Inf Model; 2012 Dec 21; 52(12):3225-32. PubMed ID: 23198780
    [Abstract] [Full Text] [Related]

  • 34. Development and validation of a genetic algorithm for flexible docking.
    Jones G, Willett P, Glen RC, Leach AR, Taylor R.
    J Mol Biol; 1997 Apr 04; 267(3):727-48. PubMed ID: 9126849
    [Abstract] [Full Text] [Related]

  • 35. Docking with AutoDock4.
    Bitencourt-Ferreira G, Pintro VO, de Azevedo WF.
    Methods Mol Biol; 2019 Apr 04; 2053():125-148. PubMed ID: 31452103
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  • 36. Protein-small molecule docking with receptor flexibility in iMOLSDOCK.
    Sam Paul D, Gautham N.
    J Comput Aided Mol Des; 2018 Sep 04; 32(9):889-900. PubMed ID: 30128925
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  • 37. FWAVina: A novel optimization algorithm for protein-ligand docking based on the fireworks algorithm.
    Li J, Song Y, Li F, Zhang H, Liu W.
    Comput Biol Chem; 2020 Oct 04; 88():107363. PubMed ID: 32861160
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  • 38. DINC 2.0: A New Protein-Peptide Docking Webserver Using an Incremental Approach.
    Antunes DA, Moll M, Devaurs D, Jackson KR, Lizée G, Kavraki LE.
    Cancer Res; 2017 Nov 01; 77(21):e55-e57. PubMed ID: 29092940
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  • 39. Ensemble docking of multiple protein structures: considering protein structural variations in molecular docking.
    Huang SY, Zou X.
    Proteins; 2007 Feb 01; 66(2):399-421. PubMed ID: 17096427
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  • 40. Protein-ligand docking using mutually orthogonal Latin squares (MOLSDOCK).
    Viji SN, Prasad PA, Gautham N.
    J Chem Inf Model; 2009 Dec 01; 49(12):2687-94. PubMed ID: 19968302
    [Abstract] [Full Text] [Related]

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