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Journal Abstract Search

277 related items for PubMed ID: 30367584

  • 1. ConnectedAlign: a PPI network alignment method for identifying conserved protein complexes across multiple species.
    Gao J, Song B, Hu X, Yan F, Wang J.
    BMC Bioinformatics; 2018 Aug 13; 19(Suppl 9):286. PubMed ID: 30367584
    [Abstract] [Full Text] [Related]

  • 2. ClusterM: a scalable algorithm for computational prediction of conserved protein complexes across multiple protein interaction networks.
    Wang Y, Jeong H, Yoon BJ, Qian X.
    BMC Genomics; 2020 Nov 18; 21(Suppl 10):615. PubMed ID: 33208103
    [Abstract] [Full Text] [Related]

  • 3. Global alignment of protein-protein interaction networks.
    Mongiovì M, Sharan R.
    Methods Mol Biol; 2013 Nov 18; 939():21-34. PubMed ID: 23192538
    [Abstract] [Full Text] [Related]

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  • 5. Pairwise alignment of protein interaction networks.
    Koyutürk M, Kim Y, Topkara U, Subramaniam S, Szpankowski W, Grama A.
    J Comput Biol; 2006 Mar 18; 13(2):182-99. PubMed ID: 16597234
    [Abstract] [Full Text] [Related]

  • 6. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
    Maskey S, Cho YR.
    BMC Genomics; 2019 Dec 24; 20(Suppl 9):964. PubMed ID: 31874635
    [Abstract] [Full Text] [Related]

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  • 8. Identifying conserved protein complexes between species by constructing interolog networks.
    Nguyen PV, Srihari S, Leong HW.
    BMC Bioinformatics; 2013 Dec 24; 14 Suppl 16(Suppl 16):S8. PubMed ID: 24564762
    [Abstract] [Full Text] [Related]

  • 9. BalanceAli: Multiple PPI Network Alignment With Balanced High Coverage and Consistency.
    Gao J, Song B, Ke W, Hu X.
    IEEE Trans Nanobioscience; 2017 Jul 24; 16(5):333-340. PubMed ID: 28541215
    [Abstract] [Full Text] [Related]

  • 10. Alignment of PPI Networks Using Semantic Similarity for Conserved Protein Complex Prediction.
    Shui Y, Cho YR.
    IEEE Trans Nanobioscience; 2016 Jun 24; 15(4):380-389. PubMed ID: 28113907
    [Abstract] [Full Text] [Related]

  • 11. A density-based clustering approach for identifying overlapping protein complexes with functional preferences.
    Hu L, Chan KC.
    BMC Bioinformatics; 2015 May 27; 16():174. PubMed ID: 26013799
    [Abstract] [Full Text] [Related]

  • 12. Evolutionary Graph Clustering for Protein Complex Identification.
    He T, Chan KCC.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 May 27; 15(3):892-904. PubMed ID: 28029628
    [Abstract] [Full Text] [Related]

  • 13. Maximum likelihood inference of the evolutionary history of a PPI network from the duplication history of its proteins.
    Li S, Choi KP, Wu T, Zhang L.
    IEEE/ACM Trans Comput Biol Bioinform; 2013 May 27; 10(6):1412-21. PubMed ID: 24407300
    [Abstract] [Full Text] [Related]

  • 14. Fuse: multiple network alignment via data fusion.
    Gligorijević V, Malod-Dognin N, Pržulj N.
    Bioinformatics; 2016 Apr 15; 32(8):1195-203. PubMed ID: 26668003
    [Abstract] [Full Text] [Related]

  • 15. PrimAlign: PageRank-inspired Markovian alignment for large biological networks.
    Kalecky K, Cho YR.
    Bioinformatics; 2018 Jul 01; 34(13):i537-i546. PubMed ID: 29949962
    [Abstract] [Full Text] [Related]

  • 16. Identification of conserved protein complexes by module alignment.
    Sun PG, Gao L, Song J.
    Int J Data Min Bioinform; 2011 Jul 01; 5(6):593-610. PubMed ID: 22295746
    [Abstract] [Full Text] [Related]

  • 17. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
    Ou-Yang L, Yan H, Zhang XF.
    BMC Bioinformatics; 2017 Dec 01; 18(Suppl 13):463. PubMed ID: 29219066
    [Abstract] [Full Text] [Related]

  • 18. L-GRAAL: Lagrangian graphlet-based network aligner.
    Malod-Dognin N, Pržulj N.
    Bioinformatics; 2015 Jul 01; 31(13):2182-9. PubMed ID: 25725498
    [Abstract] [Full Text] [Related]

  • 19. Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks.
    Liu X, Yang Z, Sang S, Zhou Z, Wang L, Zhang Y, Lin H, Wang J, Xu B.
    BMC Bioinformatics; 2018 Sep 21; 19(1):332. PubMed ID: 30241459
    [Abstract] [Full Text] [Related]

  • 20. Global alignment of multiple protein interaction networks with application to functional orthology detection.
    Singh R, Xu J, Berger B.
    Proc Natl Acad Sci U S A; 2008 Sep 02; 105(35):12763-8. PubMed ID: 18725631
    [Abstract] [Full Text] [Related]

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