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Journal Abstract Search

505 related items for PubMed ID: 31019201

  • 1. A comparative analysis of methods for de novo assembly of hymenopteran genomes using either haploid or diploid samples.
    Yahav T, Privman E.
    Sci Rep; 2019 Apr 24; 9(1):6480. PubMed ID: 31019201
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  • 2. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.
    Liu S, Zhang Y, Zhou Z, Waldbieser G, Sun F, Lu J, Zhang J, Jiang Y, Zhang H, Wang X, Rajendran KV, Khoo L, Kucuktas H, Peatman E, Liu Z.
    BMC Genomics; 2012 Nov 05; 13():595. PubMed ID: 23127152
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  • 3. Purge Haplotigs: allelic contig reassignment for third-gen diploid genome assemblies.
    Roach MJ, Schmidt SA, Borneman AR.
    BMC Bioinformatics; 2018 Nov 29; 19(1):460. PubMed ID: 30497373
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  • 4. HaploMerger2: rebuilding both haploid sub-assemblies from high-heterozygosity diploid genome assembly.
    Huang S, Kang M, Xu A.
    Bioinformatics; 2017 Aug 15; 33(16):2577-2579. PubMed ID: 28407147
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  • 5. Transcriptome assembly, gene annotation and tissue gene expression atlas of the rainbow trout.
    Salem M, Paneru B, Al-Tobasei R, Abdouni F, Thorgaard GH, Rexroad CE, Yao J.
    PLoS One; 2015 Aug 15; 10(3):e0121778. PubMed ID: 25793877
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  • 15. A high-quality annotated transcriptome of swine peripheral blood.
    Liu H, Smith TPL, Nonneman DJ, Dekkers JCM, Tuggle CK.
    BMC Genomics; 2017 Jun 24; 18(1):479. PubMed ID: 28646867
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  • 17. PARRoT- a homology-based strategy to quantify and compare RNA-sequencing from non-model organisms.
    Gan RC, Chen TW, Wu TH, Huang PJ, Lee CC, Yeh YM, Chiu CH, Huang HD, Tang P.
    BMC Bioinformatics; 2016 Dec 22; 17(Suppl 19):513. PubMed ID: 28155708
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  • 18. A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
    Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Marçais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB.
    Biol Direct; 2014 Oct 14; 9(1):20. PubMed ID: 25319552
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  • 20. Transcriptome analysis of functional differentiation between haploid and diploid cells of Emiliania huxleyi, a globally significant photosynthetic calcifying cell.
    von Dassow P, Ogata H, Probert I, Wincker P, Da Silva C, Audic S, Claverie JM, de Vargas C.
    Genome Biol; 2009 Oct 14; 10(10):R114. PubMed ID: 19832986
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