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Journal Abstract Search

318 related items for PubMed ID: 31081635

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  • 2. Proteomics Quality Control: Quality Control Software for MaxQuant Results.
    Bielow C, Mastrobuoni G, Kempa S.
    J Proteome Res; 2016 Mar 04; 15(3):777-87. PubMed ID: 26653327
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  • 4. Definitive screening design enables optimization of LC-ESI-MS/MS parameters in proteomics.
    Aburaya S, Aoki W, Minakuchi H, Ueda M.
    Biosci Biotechnol Biochem; 2017 Dec 04; 81(12):2237-2243. PubMed ID: 29068257
    [Abstract] [Full Text] [Related]

  • 5. Visualization of LC-MS/MS proteomics data in MaxQuant.
    Tyanova S, Temu T, Carlson A, Sinitcyn P, Mann M, Cox J.
    Proteomics; 2015 Apr 04; 15(8):1453-6. PubMed ID: 25644178
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  • 6. PSpecteR: A User-Friendly and Interactive Application for Visualizing Top-Down and Bottom-Up Proteomics Data in R.
    Degnan DJ, Bramer LM, White AM, Zhou M, Bilbao A, McCue LA.
    J Proteome Res; 2021 Apr 02; 20(4):2014-2020. PubMed ID: 33661636
    [Abstract] [Full Text] [Related]

  • 7. KYSS: mass spectrometry data quality assessment for protein analysis and large-scale proteomics.
    Such-Sanmartín G, Sidoli S, Ventura-Espejo E, Jensen ON.
    Biochem Biophys Res Commun; 2014 Mar 21; 445(4):702-7. PubMed ID: 24480439
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  • 8. QCMAP: An Interactive Web-Tool for Performance Diagnosis and Prediction of LC-MS Systems.
    Kim T, Chen IR, Parker BL, Humphrey SJ, Crossett B, Cordwell SJ, Yang P, Yang JYH.
    Proteomics; 2019 Jul 21; 19(13):e1900068. PubMed ID: 31099962
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  • 12. i-RUBY: a novel software for quantitative analysis of highly accurate shotgun-proteomics liquid chromatography/tandem mass spectrometry data obtained without stable-isotope labeling of proteins.
    Wada K, Ogiwara A, Nagasaka K, Tanaka N, Komatsu Y.
    Rapid Commun Mass Spectrom; 2011 Apr 15; 25(7):960-8. PubMed ID: 21416533
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  • 14. Decon2LS: An open-source software package for automated processing and visualization of high resolution mass spectrometry data.
    Jaitly N, Mayampurath A, Littlefield K, Adkins JN, Anderson GA, Smith RD.
    BMC Bioinformatics; 2009 Mar 17; 10():87. PubMed ID: 19292916
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  • 15. Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification.
    High AA, Tan H, Pagala VR, Niu M, Cho JH, Wang X, Bai B, Peng J.
    J Vis Exp; 2017 Nov 15; (129):. PubMed ID: 29286450
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  • 16. Bioinformatics for LC-MS/MS-based proteomics.
    Jacob RJ.
    Methods Mol Biol; 2010 Nov 15; 658():61-91. PubMed ID: 20839098
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  • 18. mpwR: an R package for comparing performance of mass spectrometry-based proteomic workflows.
    Kardell O, Breimann S, Hauck SM.
    Bioinformatics; 2023 Jun 01; 39(6):. PubMed ID: 37267150
    [Abstract] [Full Text] [Related]

  • 19. SimExTargId: a comprehensive package for real-time LC-MS data acquisition and analysis.
    Edmands WMB, Hayes J, Rappaport SM.
    Bioinformatics; 2018 Oct 15; 34(20):3589-3590. PubMed ID: 29790936
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